RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 ACKR2O00590 384 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RNF8O76064 485 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ZBTB7AO95365 584 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ANP32DO95626 131 aa9□□□□□ -0.97
RFX3-202ENST00000358730 APOC2P02655 101 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RBP3P10745 1247 aa9□□□□□ -0.97
RFX3-202ENST00000358730 MIPP30301 263 aa9□□□□□ -0.97
RFX3-202ENST00000358730 NRLP54845 237 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RNASELQ05823 741 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 PTPN11Q06124 597 aaPredicted RBP9□□□□□ -0.97
RFX3-202ENST00000358730 TAZQ16635 292 aa9□□□□□ -0.97
RFX3-202ENST00000358730 SH3D19Q5HYK7 790 aa9□□□□□ -0.97
RFX3-202ENST00000358730 FAM102AQ5T9C2 384 aaPredicted RBP9□□□□□ -0.97
RFX3-202ENST00000358730 FYB2Q5VWT5 728 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ZNF449Q6P9G9 518 aa9□□□□□ -0.97
RFX3-202ENST00000358730 DPH6Q7L8W6 267 aa9□□□□□ -0.97
RFX3-202ENST00000358730 OTOAQ7RTW8 1153 aa9□□□□□ -0.97
RFX3-202ENST00000358730 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9□□□□□ -0.97
RFX3-202ENST00000358730 SPATA18Q8TC71 538 aa9□□□□□ -0.97
RFX3-202ENST00000358730 NSMCE1Q8WV22 266 aa9□□□□□ -0.97
RFX3-202ENST00000358730 ZNF75CPQ92670 426 aaPredicted RBP9□□□□□ -0.97
RFX3-202ENST00000358730 ZBTB10Q96DT7 871 aa9□□□□□ -0.97
RFX3-202ENST00000358730 TWNKQ96RR1 684 aa9□□□□□ -0.97
RFX3-202ENST00000358730 KLF6Q99612 283 aaPredicted RBP9□□□□□ -0.97
RFX3-202ENST00000358730 GPR20Q99678 358 aa9□□□□□ -0.97
RFX3-202ENST00000358730 SPATC1LQ9H0A9 340 aa9□□□□□ -0.97
RFX3-202ENST00000358730 CDT1Q9H211 546 aa9□□□□□ -0.97
RFX3-202ENST00000358730 LRMDAQ9H2I8 198 aa9□□□□□ -0.97
RFX3-202ENST00000358730 RPF1Q9H9Y2 349 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 PTPRHQ9HD43 1115 aa9□□□□□ -0.97
RFX3-202ENST00000358730 SSU72Q9NP77 194 aaKnown RBP9□□□□□ -0.97
RFX3-202ENST00000358730 NPHS2Q9NP85 383 aa9□□□□□ -0.97
RFX3-202ENST00000358730 SIX4Q9UIU6 781 aa9□□□□□ -0.97
RFX3-202ENST00000358730 HAO1Q9UJM8 370 aa9□□□□□ -0.97
RFX3-202ENST00000358730 USP18Q9UMW8 372 aa9□□□□□ -0.97
RFX3-202ENST00000358730 C15orf41Q9Y2V0 281 aa9□□□□□ -0.97
RFX3-202ENST00000358730 MCM3APO60318 1980 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 E7ESA3 106 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 MICAL2O94851 1124 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 ITGB3P05106 788 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 CCND1P24385 295 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 CLCN3P51790 818 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 VGLL4Q14135 290 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 ADGRD1Q6QNK2 874 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 C1orf127Q8N9H9 656 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 SLC4A11Q8NBS3 891 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 UTP4Q969X6 686 aaKnown RBP8.99□□□□□ -0.97
RFX3-202ENST00000358730 ADPGKQ9BRR6 497 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 DHRS4Q9BTZ2 278 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 BCO2Q9BYV7 579 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.99□□□□□ -0.97
RFX3-202ENST00000358730 IGKV6-21A0A0C4DH24 114 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 ATP5HO75947 161 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 ATP2A2P16615 1042 aaKnown RBP8.99□□□□□ -0.97
RFX3-202ENST00000358730 ROR1Q01973 937 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 SYCP2LQ5T4T6 812 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 NPNTQ6UXI9 565 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 ZC3H18Q86VM9 953 aaKnown RBP8.99□□□□□ -0.97
RFX3-202ENST00000358730 TCP10LQ8TDR4 215 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 DCAKDQ8WVC6 231 aa8.99□□□□□ -0.97
RFX3-202ENST00000358730 RSRC1Q96IZ7 334 aaKnown RBP8.99□□□□□ -0.97
RFX3-202ENST00000358730 C12orf65Q9H3J6 166 aaKnown RBP8.99□□□□□ -0.97
RFX3-202ENST00000358730 ZMYND8Q9ULU4 1186 aaPredicted RBP8.99□□□□□ -0.97
RFX3-202ENST00000358730 POLR2AP24928 1970 aaKnown RBP8.99□□□□□ -0.97
RFX3-202ENST00000358730 IL18RAPO95256 599 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 TRUB2O95900 331 aaKnown RBP8.98□□□□□ -0.97
RFX3-202ENST00000358730 PGK2P07205 417 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 TROVE2P10155 538 aaKnown RBP eCLIP8.98□□□□□ -0.97
RFX3-202ENST00000358730 CLNS1AP54105 237 aaKnown RBP8.98□□□□□ -0.97
RFX3-202ENST00000358730 MBTD1Q05BQ5 628 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 MMRN1Q13201 1228 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 TLDC1Q6P9B6 456 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 GADL1Q6ZQY3 521 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 CCDC125Q86Z20 511 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 EXOC8Q8IYI6 725 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 MZB1Q8WU39 189 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 SPATA33Q96N06 139 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 PEBP4Q96S96 227 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 ELOVL4Q9GZR5 314 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 FZD8Q9H461 694 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 MINDY3Q9H8M7 445 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 SLC17A7Q9P2U7 560 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.98□□□□□ -0.97
RFX3-202ENST00000358730 LOC102724159A0A0B4J2E5 919 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 SMAPO00193 183 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 PIK3R2O00459 728 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 TM9SF1O15321 606 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 LGR5O75473 907 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 CBX6O95503 412 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 ELK3P41970 407 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 CDH6P55285 790 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 PWP2Q15269 919 aaKnown RBP8.98□□□□□ -0.97
RFX3-202ENST00000358730 CELF3Q5SZQ8 465 aaKnown RBP8.98□□□□□ -0.97
RFX3-202ENST00000358730 JADE1Q6IE81 842 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 DARS2Q6PI48 645 aaKnown RBP8.98□□□□□ -0.97
RFX3-202ENST00000358730 NLRP9Q7RTR0 991 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 AGGF1Q8N302 714 aaeCLIP8.98□□□□□ -0.97
RFX3-202ENST00000358730 CMASQ8NFW8 434 aaPredicted RBP8.98□□□□□ -0.97
RFX3-202ENST00000358730 TMEM176AQ96HP8 235 aa8.98□□□□□ -0.97
RFX3-202ENST00000358730 RSAD1Q9HA92 442 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms