RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ISLR2Q6UXK2 745 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TSPAN18Q96SJ8 248 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 C9orf16Q9BUW7 83 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 DENND2DQ9H6A0 471 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 GREM2Q9H772 168 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PAK5Q9P286 719 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 NAGPAQ9UK23 515 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PLA2R1Q13018 1463 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 RCCD1A6NED2 376 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ZBTB11O95625 1053 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 FOXD4Q12950 439 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TTC30AQ86WT1 665 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 IGDCC4Q8TDY8 1250 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TIPINQ9BVW5 301 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 AMNQ9BXJ7 453 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 BARHL2Q9NY43 387 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGAP20Q9P2F6 1191 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 PRAMEF22A3QJZ6 481 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 APOA4P06727 396 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 TFDP1Q14186 410 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 FBXW8Q8N3Y1 598 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 FNIP1Q8TF40 1166 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 OTUD5Q96G74 571 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SENP2Q9HC62 589 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 MAGI3Q5TCQ9 1506 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SESN2P58004 480 aaPredicted RBP6.3□□□□□ -1.4
VPS13B-203ENST00000358544 OSCARQ8IYS5 282 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF577Q9BSK1 485 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 SLC5A4Q9NY91 659 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 ATP6V1HQ9UI12 483 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 DSEQ9UL01 958 aa6.3□□□□□ -1.4
VPS13B-203ENST00000358544 USP17L3A6NCW0 530 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 USP17L4A6NCW7 530 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PEX1O43933 1283 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 TAP1Q03518 808 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 POU5F1BQ06416 359 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 GPATCH4Q5T3I0 446 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 NT5DC1Q5TFE4 455 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 IKBIPQ70UQ0 350 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 USP17L1Q7RTZ2 530 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SATL1Q86VE3 508 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KRT35Q92764 455 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 MLH3Q9UHC1 1453 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SDC4P31431 198 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 AKR1D1P51857 326 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KCNK10P57789 538 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 STX5Q13190 355 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 AP3B2Q13367 1082 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PTK6Q13882 451 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGAP17Q68EM7 881 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 LAYNQ6UX15 382 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF333Q96JL9 665 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KLHL8Q9P2G9 620 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 GRID1Q9ULK0 1009 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SDK2Q58EX2 2172 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PHC1P78364 1004 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SLC15A2Q16348 729 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ATG14Q6ZNE5 492 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 TAMM41Q96BW9 452 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 MTERF3Q96E29 417 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 REXO4Q9GZR2 422 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 C6orf203Q9P0P8 240 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KLHL3Q9UH77 587 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 DENND4BO75064 1496 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 LAMC1P11047 1609 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 C5orf60A6NFR6 353 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 GNPATO15228 680 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SEC24AO95486 1093 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 KCNQ4P56696 695 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 EXOC3L1Q86VI1 746 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 USP13Q92995 863 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 EHD3Q9NZN3 535 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ZNF219Q9P2Y4 722 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PCDHGC5Q9Y5F6 944 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SUPT3HB4E1H0 165 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ITGA2BP08514 1039 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 NFKBIAP25963 317 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 IL12AP29459 219 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ACTR2P61160 394 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 BNIP1Q12981 228 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 CDC26Q8NHZ8 85 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 RUBCNLQ9H714 662 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ARL8BQ9NVJ2 186 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 BCS1LQ9Y276 419 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 SONP18583 2426 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 RNF103O00237 685 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 STAT3P40763 770 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 ANO4Q32M45 955 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 TCF12Q99081 682 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 GPBP1L1Q9HC44 474 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 NGRNQ9NPE2 291 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 TCF7L2Q9NQB0 619 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 XPO7Q9UIA9 1087 aaKnown RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PLXNB1O43157 2135 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 INO80Q9ULG1 1556 aaPredicted RBP6.29□□□□□ -1.4
VPS13B-203ENST00000358544 BTNL10A8MVZ5 291 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 PIK3CDO00329 1044 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 BIRC5O15392 142 aa6.29□□□□□ -1.4
VPS13B-203ENST00000358544 HSPA2P54652 639 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms