RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 FAM193AP78312 1265 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 RPL6Q02878 288 aaKnown RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 TRIP6Q15654 476 aaKnown RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 ZC2HC1CQ53FD0 456 aaPredicted RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 INTS6LQ5JSJ4 861 aaKnown RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 SLC39A4Q6P5W5 647 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 SLC36A4Q6YBV0 504 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 SPATA2LQ8IUW3 424 aaPredicted RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 ADGRG2Q8IZP9 1017 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 PDCL2Q8N4E4 241 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 MINDY1Q8N5J2 469 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 FAM184AQ8NB25 1140 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 FUBP3Q96I24 572 aaKnown RBP eCLIP17.01■□□□□ 0.31
IFT20-202ENST00000357896 PLIN2Q99541 437 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 CCDC86Q9H6F5 360 aaKnown RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 CAPN10Q9HC96 672 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 GTF3C4Q9UKN8 822 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 AGO2Q9UKV8 859 aaKnown RBP17.01■□□□□ 0.31
IFT20-202ENST00000357896 PCDHB9Q9Y5E1 797 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 IGSF10Q6WRI0 2623 aa17.01■□□□□ 0.31
IFT20-202ENST00000357896 MYH11P35749 1972 aa17■□□□□ 0.31
IFT20-202ENST00000357896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17■□□□□ 0.31
IFT20-202ENST00000357896 LEFTY2O00292 366 aa17■□□□□ 0.31
IFT20-202ENST00000357896 FAM13AO94988 1023 aa17■□□□□ 0.31
IFT20-202ENST00000357896 IL18RAPO95256 599 aa17■□□□□ 0.31
IFT20-202ENST00000357896 CYP17A1P05093 508 aa17■□□□□ 0.31
IFT20-202ENST00000357896 ANK1P16157 1881 aa17■□□□□ 0.31
IFT20-202ENST00000357896 SCN1AP35498 2009 aa17■□□□□ 0.31
IFT20-202ENST00000357896 GRIA2P42262 883 aa17■□□□□ 0.31
IFT20-202ENST00000357896 GTF2BQ00403 316 aa17■□□□□ 0.31
IFT20-202ENST00000357896 COL28A1Q2UY09 1125 aa17■□□□□ 0.31
IFT20-202ENST00000357896 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
IFT20-202ENST00000357896 ADAMTS14Q8WXS8 1223 aa17■□□□□ 0.31
IFT20-202ENST00000357896 CEP295NLQ96MC4 621 aa17■□□□□ 0.31
IFT20-202ENST00000357896 DNAAF2Q9NVR5 837 aaKnown RBP17■□□□□ 0.31
IFT20-202ENST00000357896 EHD2Q9NZN4 543 aa17■□□□□ 0.31
IFT20-202ENST00000357896 TCRBV21S2A2A0A5A6 115 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 ANTXRLA6NF34 631 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 EIF4E1BA6NMX2 242 aaKnown RBP16.99■□□□□ 0.31
IFT20-202ENST00000357896 CD59P13987 128 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 PCSK1P29120 753 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 LHX1P48742 406 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 ZNF131P52739 623 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 RESTQ13127 1097 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 DHCR24Q15392 516 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 TRMT11Q7Z4G4 463 aaKnown RBP16.99■□□□□ 0.31
IFT20-202ENST00000357896 FILIP1Q7Z7B0 1213 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 KCNV2Q8TDN2 545 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 PKMYT1Q99640 499 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 FSCN3Q9NQT6 498 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 ARHGEF4Q9NR80 690 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.99■□□□□ 0.31
IFT20-202ENST00000357896 TRPM5Q9NZQ8 1165 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 L1RE1Q9UN81 338 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 STYXL1Q9Y6J8 313 aa16.99■□□□□ 0.31
IFT20-202ENST00000357896 ZBTB24O43167 697 aaPredicted RBP16.98■□□□□ 0.31
IFT20-202ENST00000357896 ADH1CP00326 375 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 ACAT1P24752 427 aaKnown RBP16.98■□□□□ 0.31
IFT20-202ENST00000357896 MAGEA11P43364 429 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 KIR2DL1P43626 348 aaPredicted RBP16.98■□□□□ 0.31
IFT20-202ENST00000357896 SLC6A11P48066 632 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 PPP3CCP48454 512 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 SLC7A9P82251 487 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 ZXDBP98169 803 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 ATP2C1P98194 919 aaPredicted RBP16.98■□□□□ 0.31
IFT20-202ENST00000357896 ZNF33AQ06730 810 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 PREPLQ4J6C6 727 aaPredicted RBP16.98■□□□□ 0.31
IFT20-202ENST00000357896 TMEM119Q4V9L6 283 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 CCNI2Q6ZMN8 369 aaPredicted RBP16.98■□□□□ 0.31
IFT20-202ENST00000357896 C4orf50Q6ZRC1 276 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 NUDT18Q6ZVK8 323 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 GPBP1Q86WP2 473 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 CCDC83Q8IWF9 413 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 SPATA17Q96L03 361 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 LIMCH1Q9UPQ0 1083 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 TNRC6BQ9UPQ9 1833 aaKnown RBP16.98■□□□□ 0.31
IFT20-202ENST00000357896 PTPRDP23468 1912 aa16.98■□□□□ 0.31
IFT20-202ENST00000357896 A0A1W2PQD8 194 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 ANKRD63C9JTQ0 380 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 SLC26A4O43511 780 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 ADAM23O75077 832 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 KRT18P05783 430 aaKnown RBP16.97■□□□□ 0.31
IFT20-202ENST00000357896 CHRM1P11229 460 aaPredicted RBP16.97■□□□□ 0.31
IFT20-202ENST00000357896 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
IFT20-202ENST00000357896 POSTNQ15063 836 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 EMC10Q5UCC4 262 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 VSTM1Q6UX27 236 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 SFTPA1Q8IWL2 248 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 LRRC52Q8N7C0 313 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 CACTINQ8WUQ7 758 aaKnown RBP16.97■□□□□ 0.31
IFT20-202ENST00000357896 ZHX3Q9H4I2 956 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 GDAP2Q9NXN4 497 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 AGAP1Q9UPQ3 857 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 APOBEC2Q9Y235 224 aaKnown RBP16.97■□□□□ 0.31
IFT20-202ENST00000357896 PI4KAP42356 2102 aa16.97■□□□□ 0.31
IFT20-202ENST00000357896 TCHHQ07283 1943 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms