RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 TOM1L1O75674 476 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 PIGRP01833 764 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 F7P08709 466 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-203ENST00000356948 KDELR1P24390 212 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 DUOXA2Q1HG44 320 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 CDHR3Q6ZTQ4 885 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 TTC7BQ86TV6 843 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 FBXO16Q8IX29 292 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-203ENST00000356948 MECRQ9BV79 373 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 SYNCQ9H7C4 482 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 XPO7Q9UIA9 1087 aaKnown RBP15.97■□□□□ 0.15
PTBP1-203ENST00000356948 A0A0G2JND7 137 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 EDF1O60869 148 aaKnown RBP15.97■□□□□ 0.15
PTBP1-203ENST00000356948 TFE3P19532 575 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-203ENST00000356948 RAD23BP54727 409 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 CCDC6Q16204 474 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 NAT8LQ8N9F0 302 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 KCTD6Q8NC69 237 aa15.97■□□□□ 0.15
PTBP1-203ENST00000356948 ZNF483Q8TF39 744 aaPredicted RBP15.97■□□□□ 0.15
PTBP1-203ENST00000356948 NIFKQ9BYG3 293 aaKnown RBP15.97■□□□□ 0.15
PTBP1-203ENST00000356948 EVPLQ92817 2033 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 IRF6O14896 467 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 STAM2O75886 525 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 ITGB3P05106 788 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 GMPRP36959 345 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 ELK3P41970 407 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 ATXN1P54253 815 aaKnown RBP15.96■□□□□ 0.15
PTBP1-203ENST00000356948 HHATQ5VTY9 493 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 CENPUQ71F23 418 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 RELL1Q8IUW5 271 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 C1orf127Q8N9H9 656 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 LRRC8CQ8TDW0 803 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 C10orf82Q8WW14 230 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 IGKV6D-21A0A0A0MT36 114 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 E5RJQ4 531 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 CYP3A5P20815 502 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 SPARCL1Q14515 664 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 ZC3H12AQ5D1E8 599 aaKnown RBP15.96■□□□□ 0.15
PTBP1-203ENST00000356948 CES4AQ5XG92 561 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 XRRA1Q6P2D8 792 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 PPP1R21Q6ZMI0 780 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 XYLT1Q86Y38 959 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 LRRC37BQ96QE4 947 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 OSBPL1AQ9BXW6 950 aa15.96■□□□□ 0.15
PTBP1-203ENST00000356948 MAFO75444 373 aaPredicted RBP15.96■□□□□ 0.14
PTBP1-203ENST00000356948 MORF4L2Q15014 288 aa15.96■□□□□ 0.14
PTBP1-203ENST00000356948 DALRD3Q5D0E6 543 aaKnown RBP15.96■□□□□ 0.14
PTBP1-203ENST00000356948 WDR78Q5VTH9 848 aa15.96■□□□□ 0.14
PTBP1-203ENST00000356948 WDR49Q8IV35 697 aa15.96■□□□□ 0.14
PTBP1-203ENST00000356948 SPATA18Q8TC71 538 aa15.96■□□□□ 0.14
PTBP1-203ENST00000356948 RSAD2Q8WXG1 361 aa15.96■□□□□ 0.14
PTBP1-203ENST00000356948 RNPEPQ9H4A4 650 aa15.96■□□□□ 0.14
PTBP1-203ENST00000356948 TXNRD2Q9NNW7 524 aa15.96■□□□□ 0.14
PTBP1-203ENST00000356948 CXorf49A8MYA2 514 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 LDHAP00338 332 aaKnown RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 CALB1P05937 261 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 RBP3P10745 1247 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 PDK4Q16654 411 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 Q3C1V9 767 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 KBTBD12Q3ZCT8 623 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 RNF43Q68DV7 783 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 BZW1Q7L1Q6 419 aaKnown RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 MZB1Q8WU39 189 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 NKD2Q969F2 451 aaPredicted RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 SLC17A6Q9P2U8 582 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 DKC1O60832 514 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 ITGAVP06756 1048 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 NEFHP12036 1026 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 EIF3EP60228 445 aaKnown RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 NR1H3Q13133 447 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 SLC4A11Q8NBS3 891 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 DCAKDQ8WVC6 231 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 CDHR1Q96JP9 859 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 MIPEPQ99797 713 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 TBC1D10AQ9BXI6 508 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 MRPL4Q9BYD3 311 aaKnown RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 EBF2Q9HAK2 575 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 ZNF112Q9UJU3 913 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 C15orf41Q9Y2V0 281 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 HEY1Q9Y5J3 304 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 SNCAIPQ9Y6H5 919 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 SSC5DA1L4H1 1573 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 CFAP73A6NFT4 308 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 OGTO15294 1046 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 GEMIN4P57678 1058 aaKnown RBP15.95■□□□□ 0.14
PTBP1-203ENST00000356948 FAAP100Q0VG06 881 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 VGLL4Q14135 290 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 CA9Q16790 459 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 SGSM1Q2NKQ1 1148 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 MDH1BQ5I0G3 518 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 SLC30A9Q6PML9 568 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 BBOF1Q8ND07 529 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 FAM111AQ96PZ2 611 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 PCDH9Q9HC56 1237 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.95■□□□□ 0.142e-9■□□□□ 10.6
PTBP1-203ENST00000356948 ARMCX1Q9P291 453 aa15.95■□□□□ 0.14
PTBP1-203ENST00000356948 LACTBL1A8MY62 500 aa15.94■□□□□ 0.14
PTBP1-203ENST00000356948 KBTBD13C9JR72 458 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms