RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ZNF699Q32M78 642 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 MROH9Q5TGP6 573 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 TAS1R3Q7RTX0 852 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 CCDC110Q8TBZ0 833 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 EURLQ9NYK6 297 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 C10orf71Q711Q0 1435 aa13.96□□□□□ -0.17
NCDN-201ENST00000356090 MAP3K13O43283 966 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 OPHN1O60890 802 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 CACNA2D1P54289 1103 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 CDK16Q00536 496 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 GRIK3Q13003 919 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 EFHC2Q5JST6 749 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 PRPF39Q86UA1 669 aaKnown RBP13.96□□□□□ -0.18
NCDN-201ENST00000356090 NUDCD3Q8IVD9 361 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 OXNAD1Q96HP4 312 aaPredicted RBP13.96□□□□□ -0.18
NCDN-201ENST00000356090 FBXL18Q96ME1 805 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 ACSS3Q9H6R3 686 aa13.96□□□□□ -0.18
NCDN-201ENST00000356090 KLRG2A4D1S0 409 aaPredicted RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 MAGEB2O15479 319 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 DKC1O60832 514 aaKnown RBP eCLIP13.95□□□□□ -0.18
NCDN-201ENST00000356090 LYPLA2O95372 231 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 SLC34A1Q06495 639 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 KRT81Q14533 505 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 PPP6R3Q5H9R7 873 aaPredicted RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 PRAMEF18Q5VWM3 479 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 CDCA2Q69YH5 1023 aaPredicted RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 IGDCC3Q8IVU1 814 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 SAMD3Q8N6K7 520 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 TRIM56Q9BRZ2 755 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 GPATCH2LQ9NWQ4 482 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 DDX56Q9NY93 547 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 COL24A1Q17RW2 1714 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 TCRBV9S1A1TA0A576 114 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 PMM2O15305 246 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 SP100P23497 879 aaPredicted RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 POLR2BP30876 1174 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 PTGER2P43116 358 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 MCL1Q07820 350 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 PTP4A2Q12974 167 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 CCNJLQ8IV13 435 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 TMEM130Q8N3G9 435 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 POU5F2Q8N7G0 328 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 TFAP2BQ92481 460 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 FGD4Q96M96 766 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 SRPK1Q96SB4 655 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 APOL6Q9BWW8 343 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 NGRNQ9NPE2 291 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 SAR1AQ9NR31 198 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 MTO1Q9Y2Z2 717 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 KCNN4O15554 427 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 IL1R2P27930 398 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 AQP5P55064 265 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 OASLQ15646 514 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 IZUMO2Q6UXV1 221 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 TDRPQ86YL5 185 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 EGFL6Q8IUX8 553 aa13.95□□□□□ -0.18
NCDN-201ENST00000356090 PIH1D1Q9NWS0 290 aaKnown RBP13.95□□□□□ -0.18
NCDN-201ENST00000356090 APBA3O96018 575 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 KRT7P08729 469 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 ROR1Q01973 937 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 FAM102AQ5T9C2 384 aaPredicted RBP13.94□□□□□ -0.18
NCDN-201ENST00000356090 VCPIP1Q96JH7 1222 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 MRIQ9BWK5 157 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 ZC3H7BQ9UGR2 993 aaKnown RBP13.94□□□□□ -0.18
NCDN-201ENST00000356090 POLIQ9UNA4 740 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 LRCH1Q9Y2L9 728 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 SPECC1L-ADORA2AF8WAN1 911 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 ITGAVP06756 1048 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 SLFN12LQ6IEE8 588 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 EFCAB3Q8N7B9 438 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 BANPQ8N9N5 519 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 FBXO27Q8NI29 283 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 UBA3Q8TBC4 463 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.94□□□□□ -0.18
NCDN-201ENST00000356090 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 ZNRF3Q9ULT6 936 aa13.94□□□□□ -0.18
NCDN-201ENST00000356090 G3BP2Q9UN86 482 aaKnown RBP13.94□□□□□ -0.18
NCDN-201ENST00000356090 MAGED2Q9UNF1 606 aaPredicted RBP13.94□□□□□ -0.18
NCDN-201ENST00000356090 CCDC160A6NGH7 325 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 H0YCG3 227 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 INO80B-WBP1J3KQ70 363 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 TM9SF1O15321 606 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 KRT37O76014 449 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 HSPA1LP34931 641 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 RGS9BPQ6ZS82 235 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 NDUFAF2Q8N183 169 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 AGR3Q8TD06 166 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 CGRRF1Q99675 332 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 INO80BQ9C086 356 aaPredicted RBP13.93□□□□□ -0.18
NCDN-201ENST00000356090 VPS11Q9H270 941 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 NDE1Q9NXR1 346 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 DRG1Q9Y295 367 aaKnown RBP13.93□□□□□ -0.18
NCDN-201ENST00000356090 NRAPQ86VF7 1730 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 LOC100653049A0A140TA62 436 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 TTLL13PA6NNM8 815 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 E5RJQ4 531 aa13.93□□□□□ -0.18
NCDN-201ENST00000356090 WDR46O15213 610 aaKnown RBP13.93□□□□□ -0.18
NCDN-201ENST00000356090 KRT34O76011 436 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms