RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ASS1P00966 412 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 CCDC130P13994 396 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 PRCPP42785 496 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 PGFP49763 221 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 VAMP7P51809 220 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 KPNA1P52294 538 aaPredicted RBP17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 SATB1Q01826 763 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 DMWDQ09019 674 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 ACOT1Q86TX2 421 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 FAM35AQ86V20 835 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 NELL2Q99435 816 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 RNF38Q9H0F5 515 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 MMRN2Q9H8L6 949 aa17.82■□□□□ 0.44
PDLIM7-201ENST00000355572 TRIM49BA6NDI0 452 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 SCAMP3O14828 347 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 GADD45BO75293 160 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 FAM163BP0C2L3 166 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 DDX6P26196 483 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 AVPR1AP37288 418 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 IFRD2Q12894 506 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 DENND5BQ6ZUT9 1274 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 FUKQ8N0W3 1084 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 ADSSL1Q8N142 457 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 SUMF1Q8NBK3 374 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 TTC16Q8NEE8 873 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 EZH1Q92800 747 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 SEMA4DQ92854 862 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 C8orf48Q96LL4 319 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 POLR3BQ9NW08 1133 aaPredicted RBP17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 MRPS17Q9Y2R5 130 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 PCDHA5Q9Y5H7 936 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 WNT6Q9Y6F9 365 aa17.81■□□□□ 0.44
PDLIM7-201ENST00000355572 MAPK13O15264 365 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 PIK3CAP42336 1068 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 NDST1P52848 882 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 AP3M2P53677 418 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 MLLT6P55198 1093 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 MCCD1P59942 119 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 ADAM9Q13443 819 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 RUNX3Q13761 415 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 CCINQ13939 588 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 BECN1Q14457 450 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 ZNF268Q14587 947 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 MAPRE1Q15691 268 aaKnown RBP17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 ISM2Q6H9L7 571 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 FSTL4Q6MZW2 842 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 DCLK2Q8N568 766 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 C12orf29Q8N999 325 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 SCAMP5Q8TAC9 235 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 SPATA20Q8TB22 786 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 WHAMMQ8TF30 809 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 SMOQ99835 787 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 LINC00597Q9H2U6 94 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 C8orf33Q9H7E9 229 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 UXTQ9UBK9 157 aaPredicted RBP17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 FBXO4Q9UKT5 387 aa17.8■□□□□ 0.44
PDLIM7-201ENST00000355572 ZNF840PA6NDX5 716 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 TRIM66O15016 1216 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 MAGEA9P43362 315 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 NOP14P78316 857 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 FAM160A1Q05DH4 1040 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 TAF10Q12962 218 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 MTF1Q14872 753 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 GAB4Q2WGN9 574 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 ITPRIPL2Q3MIP1 535 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 RALGPS2Q86X27 583 aaPredicted RBP17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 ZBTB44Q8NCP5 570 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 SH3RF2Q8TEC5 729 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 WBP2Q969T9 261 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 KIF9Q9HAQ2 790 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 FAM49BQ9NUQ9 324 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 FRMD4BQ9Y2L6 1034 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 OTOGLQ3ZCN5 2332 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 RIF1Q5UIP0 2472 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 CFAP54Q96N23 3096 aa17.79■□□□□ 0.44
PDLIM7-201ENST00000355572 TRAV19A0A0A6YYK7 116 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 K7ESF4 209 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 IKBKBO14920 756 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 NCAM2O15394 837 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 LILRB5O75023 590 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 CLSTN1O94985 981 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 OLFM2O95897 454 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 OAS1P00973 400 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 CKMP06732 381 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 USP17L7P0C7H9 530 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 BMP6P22004 513 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 ANXA13P27216 316 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 NUCB2P80303 420 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 PLCB2Q00722 1185 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 SGSM1Q2NKQ1 1148 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 EML3Q32P44 896 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 ZNF528Q3MIS6 628 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 ANKRD40Q6AI12 368 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 GPRIN1Q7Z2K8 1008 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 ZC3H3Q8IXZ2 948 aaKnown RBP17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
PDLIM7-201ENST00000355572 KRT82Q9NSB4 513 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms