RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SPHKAPQ2M3C7 1700 aa18.7■□□□□ 0.58
COL18A1-202ENST00000355480 RNASEH1O60930 286 aaKnown RBP18.69■□□□□ 0.58
COL18A1-202ENST00000355480 SLC13A5Q86YT5 568 aaPredicted RBP18.69■□□□□ 0.58
COL18A1-202ENST00000355480 DNAJC7Q99615 494 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 STARD7Q9NQZ5 370 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 CAND2O75155 1236 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 MLNP12872 115 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 EFEMP1Q12805 493 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 C11orf74Q86VG3 221 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 DDI1Q8WTU0 396 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 KCNF1Q9H3M0 494 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 RNF112Q9ULX5 631 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 FOXN3O00409 490 aaPredicted RBP18.69■□□□□ 0.58
COL18A1-202ENST00000355480 PON1P27169 355 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 AGAP9Q5VTM2 703 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 PRPF39Q86UA1 669 aaKnown RBP18.69■□□□□ 0.58
COL18A1-202ENST00000355480 ISCUQ9H1K1 167 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL18A1-202ENST00000355480 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.69■□□□□ 0.58
COL18A1-202ENST00000355480 WDR47O94967 919 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 RAP1GAPP47736 663 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 C2CD6Q53TS8 623 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 BTNL9Q6UXG8 535 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 SLFN11Q7Z7L1 901 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 ADCK1Q86TW2 530 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 CCDC33Q8N5R6 958 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 TNIP2Q8NFZ5 429 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 TPCN2Q8NHX9 752 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 BLOC1S6Q9UL45 172 aa18.69■□□□□ 0.58
COL18A1-202ENST00000355480 LOC100653049A0A140TA62 436 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 B2RBV5 119 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 KRT34O76011 436 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 KCNT1Q5JUK3 1230 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 TIGD7Q6NT04 549 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-202ENST00000355480 COL23A1Q86Y22 540 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-202ENST00000355480 PLD3Q8IV08 490 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 ZSWIM1Q9BR11 485 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 DSEQ9UL01 958 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 F8W810 466 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 BCAT1P54687 386 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 MAP3K7CLP57077 242 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 SYTL2Q9HCH5 934 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 ZNF229Q9UJW7 825 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 TRPC5OSA6NMA1 111 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 ZBTB39O15060 712 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 SREBF1P36956 1147 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 PHKG1Q16816 387 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
COL18A1-202ENST00000355480 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 CGRRF1Q99675 332 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 ADCY3O60266 1144 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 GSNP06396 782 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 FAM172AQ8WUF8 416 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 VPS28Q9UK41 221 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 ATP11BQ9Y2G3 1177 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 SLC12A8A0AV02 714 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 PDIA6Q15084 440 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 CHMP1BQ7LBR1 199 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 DIS3LQ8TF46 1054 aaKnown RBP18.68■□□□□ 0.58
COL18A1-202ENST00000355480 CBWD1Q9BRT8 395 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 PXMP2Q9NR77 195 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 IPPQ9Y573 584 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 TECPR2O15040 1411 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 PTPRUQ92729 1446 aa18.68■□□□□ 0.58
COL18A1-202ENST00000355480 SUPT7LO94864 414 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 GYS1P13807 737 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 PBLDP30039 288 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 EPHB3P54753 998 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 EIF2B5Q13144 721 aaKnown RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 DENND1BQ6P3S1 775 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 SETD3Q86TU7 594 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 GALNT4Q8N4A0 578 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 SHCBP1LQ9BZQ2 653 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 EIF3LQ9Y262 564 aaKnown RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 NCF1BA6NI72 391 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 NCF1CA8MVU1 366 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 VPS26AO75436 327 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 NCF1P14598 390 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 PRIM2P49643 509 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 CDC16Q13042 620 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 MOXD1Q6UVY6 613 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 ECSITQ9BQ95 431 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 GPATCH2LQ9NWQ4 482 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 RFX3P48380 749 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 SLC29A2Q14542 456 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 OPTNQ96CV9 577 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 EMILIN2Q9BXX0 1053 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 NMRK1Q9NWW6 199 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 TFR2Q9UP52 801 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 SPACA6W5XKT8 324 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 APOA4P06727 396 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 GARTP22102 1010 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 PDK2Q15119 407 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 ZNF284Q2VY69 593 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 DEFB128Q7Z7B8 93 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 UNC45BQ8IWX7 931 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 FNTAP49354 379 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 CAMK2GQ13555 558 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-202ENST00000355480 CACHD1Q5VU97 1274 aa18.67■□□□□ 0.58
COL18A1-202ENST00000355480 ZNF280DQ6N043 979 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms