RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SYDE2Q5VT97 1194 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 ANKRD22Q5VYY1 191 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 KLHL35Q6PF15 583 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 ADGRD1Q6QNK2 874 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 CBWD2Q8IUF1 395 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 TAS1R2Q8TE23 839 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 FAM81BQ96LP2 452 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 PRICKLE1Q96MT3 831 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 DMAC2Q9NW81 257 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 DNAJB4Q9UDY4 337 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 XPO7Q9UIA9 1087 aaKnown RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 AK5Q9Y6K8 562 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 SNED1Q8TER0 1413 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 SLITRK3O94933 977 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 TFAP2AP05549 437 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 WEE2P0C1S8 567 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 POLR2MP0CAP2 368 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 ZFXP17010 805 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 NELFEP18615 380 aaKnown RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 PCSK6P29122 969 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 CIITAP33076 1130 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 HDAC4P56524 1084 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 BMPR2Q13873 1038 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 LPIN1Q14693 890 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 TCEAL1Q15170 157 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 SF3B3Q15393 1217 aaKnown RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 TLR1Q15399 786 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 OASLQ15646 514 aaKnown RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 KBTBD12Q3ZCT8 623 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 TMC7Q7Z402 723 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 PATL1Q86TB9 770 aaKnown RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 SLC51AQ86UW1 340 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 WDR75Q8IWA0 830 aaKnown RBP7.96□□□□□ -1.14
BRCA1-201ENST00000352993 ACCSQ96QU6 501 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 NACC1Q96RE7 527 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 TIMMDC1Q9NPL8 285 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 SEL1LQ9UBV2 794 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 DMTF1Q9Y222 760 aa7.96□□□□□ -1.14
BRCA1-201ENST00000352993 NRXN2Q9P2S2 1712 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 A0A088AWK7 358 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 CFLARO15519 480 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 PEX1O43933 1283 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 TBC1D12O60347 775 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 PSMD7P51665 324 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 PPP4CP60510 307 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 NAA20P61599 178 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 STX3Q13277 289 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 KLF1Q13351 362 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 MAP7D1Q3KQU3 841 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 MFSD14BQ5SR56 506 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 RNASEH2BQ5TBB1 312 aaKnown RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 LMBRD2Q68DH5 695 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 KRT39Q6A163 491 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 UGT2A3Q6UWM9 527 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 NCCRP1Q6ZVX7 275 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 ALLCQ8N6M5 410 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 EXD1Q8NHP7 514 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 GIPC3Q8TF64 312 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 GAB3Q8WWW8 586 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 SHC3Q92529 594 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 DCUN1D1Q96GG9 259 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 CCT7Q99832 543 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 POLR3CQ9BUI4 534 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 RTFDC1Q9BY42 306 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 ACSS3Q9H6R3 686 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 MRPL47Q9HD33 250 aaKnown RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 STRIP2Q9ULQ0 834 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 SHOC2Q9UQ13 582 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 UBR2Q8IWV8 1755 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 RBM47A0AV96 593 aaKnown RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 SLC16A4O15374 487 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 SLC26A4O43511 780 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 PSTPIP1O43586 416 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 STIP1P31948 543 aaKnown RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 MSX2P35548 267 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 AP3B2Q13367 1082 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 HNRNPDQ14103 355 aaKnown RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 SLFN13Q68D06 897 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 AMIGO2Q86SJ2 522 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 FBXO11Q86XK2 927 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 PPIL6Q8IXY8 311 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 TRIM11Q96F44 468 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 MAML3Q96JK9 1138 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 ZFRQ96KR1 1074 aaKnown RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 CSRNP1Q96S65 589 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 AMNQ9BXJ7 453 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 TMEM206Q9H813 350 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 SSU72Q9NP77 194 aaKnown RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 C1orf112Q9NSG2 853 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 BARX2Q9UMQ3 279 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-201ENST00000352993 PLA2G4CQ9UP65 541 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 AP4B1Q9Y6B7 739 aa7.95□□□□□ -1.14
BRCA1-201ENST00000352993 NOP56O00567 594 aaKnown RBP7.94□□□□□ -1.14
BRCA1-201ENST00000352993 MEIS2O14770 477 aa7.94□□□□□ -1.14
BRCA1-201ENST00000352993 TBX3O15119 743 aa7.94□□□□□ -1.14
BRCA1-201ENST00000352993 TNFAIP8O95379 198 aa7.94□□□□□ -1.14
BRCA1-201ENST00000352993 ADSSP30520 456 aa7.94□□□□□ -1.14
BRCA1-201ENST00000352993 GTF2H1P32780 548 aa7.94□□□□□ -1.14
BRCA1-201ENST00000352993 ELK3P41970 407 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms