RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CXCL8P10145 99 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 RAD23BP54727 409 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 CTC1Q2NKJ3 1217 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 PARP6Q2NL67 630 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 FAXCQ5TGI0 409 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 CLNKQ7Z7G1 428 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 PIWIL1Q96J94 861 aaKnown RBP18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 NLRP4Q96MN2 994 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 DONSONQ9NYP3 566 aa18.94■□□□□ 0.62
PTP4A3-202ENST00000349124 CFAP69A5D8W1 941 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 ICAM3P32942 547 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 HSDL1Q3SXM5 330 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 KBTBD12Q3ZCT8 623 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 ANGEL2Q5VTE6 544 aaKnown RBP18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 PPP1R2P3Q6NXS1 205 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 FAM111AQ96PZ2 611 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 NUDCD1Q96RS6 583 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 MANSC1Q9H8J5 431 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 MINDY3Q9H8M7 445 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 ARL8BQ9NVJ2 186 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 HEY2Q9UBP5 337 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 SIX4Q9UIU6 781 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 ZWINTO95229 277 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 ARIH2O95376 493 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 GNAZP19086 355 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 ABL2P42684 1182 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 YWHAEP62258 255 aaKnown RBP18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 CRYMQ14894 314 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 TRIM68Q6AZZ1 485 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 C1orf228Q6PIY5 440 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 POLNQ7Z5Q5 900 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 PDIK1LQ8N165 341 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 MAB21L3Q8N8X9 362 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 CNKSR2Q8WXI2 1034 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 TTC17Q96AE7 1141 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 TRIM56Q9BRZ2 755 aaKnown RBP18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 RNPEPL1Q9HAU8 725 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 ZNF112Q9UJU3 913 aa18.93■□□□□ 0.62
PTP4A3-202ENST00000349124 TCRBV9S1A1TA0A576 114 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 SOWAHBA6NEL2 793 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 INO80B-WBP1J3KQ70 363 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 KRT7P08729 469 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 IQCF3P0C7M6 154 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 PHBP35232 272 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 RFC5P40937 340 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 TAP1Q03518 808 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 HADHQ16836 314 aaKnown RBP18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 TMEM132AQ24JP5 1023 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 C15orf59Q2T9L4 293 aaPredicted RBP18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 TREML2Q5T2D2 321 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 TRNP1Q6NT89 227 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 PCGF5Q86SE9 256 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 CAMKK2Q96RR4 588 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 INO80BQ9C086 356 aaPredicted RBP18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 BTBD7Q9P203 1132 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 KBTBD13C9JR72 458 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 E7ESA3 106 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 C2CD2LO14523 706 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 MT-ND3P03897 115 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 NFICP08651 508 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 TPBGLP0DKB5 382 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 PYGBP11216 843 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 BGNP21810 368 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 CDO1Q16878 200 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 CDHR3Q6ZTQ4 885 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 TTC7BQ86TV6 843 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 ELOVL4Q9GZR5 314 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 HOXC10Q9NYD6 342 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 USP18Q9UMW8 372 aa18.92■□□□□ 0.62
PTP4A3-202ENST00000349124 ZBTB42B2RXF5 422 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 NFKBIEO00221 500 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 ATP5HO75947 161 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 CALB2P22676 271 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 YWHAGP61981 247 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 TAF11Q15544 211 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 SLC45A4Q5BKX6 768 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 DCAF15Q66K64 600 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 DARS2Q6PI48 645 aaKnown RBP18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 SLC4A11Q8NBS3 891 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 KCNN1Q92952 543 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 ZNF395Q9H8N7 513 aaPredicted RBP18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 KCNK13Q9HB14 408 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 GPATCH2LQ9NWQ4 482 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 RLFQ13129 1914 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 LPXNO60711 386 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 PTK7Q13308 1070 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 RASA2Q15283 850 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 TAZQ16635 292 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 DSTYKQ6XUX3 929 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 CCDC33Q8N5R6 958 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 C1orf127Q8N9H9 656 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 CMASQ8NFW8 434 aaPredicted RBP18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 C12orf42Q96LP6 360 aa18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 PPP1R1BQ9UD71 204 aaPredicted RBP18.91■□□□□ 0.62
PTP4A3-202ENST00000349124 TRUB2O95900 331 aaKnown RBP18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 NEFHP12036 1026 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 SERPINB3P29508 390 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 POLR2BP30876 1174 aaKnown RBP18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 AP3M2P53677 418 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 KHDC1Q4VXA5 237 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms