RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 C11orf70Q9BRQ4 267 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 SLC28A3Q9HAS3 691 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 CYLDQ9NQC7 956 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 TRMT1Q9NXH9 659 aaKnown RBP28.58■■■□□ 2.17
SSBP4-202ENST00000348495 CHD7Q9P2D1 2997 aa28.58■■■□□ 2.17
SSBP4-202ENST00000348495 ABCB4P21439 1286 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 GABRB2P47870 512 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 NDUFV1P49821 464 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 GPM6BQ13491 265 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 C2CD6Q53TS8 623 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 TPGS2Q68CL5 300 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 VSTM1Q6UX27 236 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 TMEM110Q86TL2 294 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 TXLNBQ8N3L3 684 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 MRPL43Q8N983 215 aaKnown RBP28.57■■■□□ 2.16
SSBP4-202ENST00000348495 KCTD13Q8WZ19 329 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 TRIM11Q96F44 468 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 HSFY1Q96LI6 401 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 CRISPLD1Q9H336 500 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 DMAP1Q9NPF5 467 aaPredicted RBP28.57■■■□□ 2.16
SSBP4-202ENST00000348495 ENTPD7Q9NQZ7 604 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 TJP2Q9UDY2 1190 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 AFF4Q9UHB7 1163 aaKnown RBP28.57■■■□□ 2.16
SSBP4-202ENST00000348495 LAMA3Q16787 3333 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 ABL1P00519 1130 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 CALB1P05937 261 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 CNPP09543 421 aaKnown RBP28.57■■■□□ 2.16
SSBP4-202ENST00000348495 MYBL1P10243 752 aa28.57■■■□□ 2.16
SSBP4-202ENST00000348495 SMC1AQ14683 1233 aaKnown RBP28.57■■■□□ 2.16
SSBP4-202ENST00000348495 MYH10P35580 1976 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.56■■■□□ 2.16
SSBP4-202ENST00000348495 HHLA1C9JL84 531 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 CCP110O43303 1012 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 ERBB2P04626 1255 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 RGS7P49802 495 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 GPC5P78333 572 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 KIF5AQ12840 1032 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 TTC9BQ8N6N2 239 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 CTNNBL1Q8WYA6 563 aaPredicted RBP28.56■■■□□ 2.16
SSBP4-202ENST00000348495 C18orf8Q96DM3 657 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 ARHGEF26Q96DR7 871 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 CERS4Q9HA82 394 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 PNPLA8Q9NP80 782 aa28.56■■■□□ 2.16
SSBP4-202ENST00000348495 NGRNQ9NPE2 291 aaKnown RBP28.56■■■□□ 2.16
SSBP4-202ENST00000348495 C2orf71A6NGG8 1288 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 BTNL10A8MVZ5 291 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 CYP1A2P05177 515 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 RRM1P23921 792 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 GSCP56915 257 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-202ENST00000348495 MSANTD4Q8NCY6 345 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 TIFAQ96CG3 184 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 ZNF653Q96CK0 615 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 AVENQ9NQS1 362 aaPredicted RBP28.55■■■□□ 2.16
SSBP4-202ENST00000348495 ST7Q9NRC1 585 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 HSFX1Q9UBD0 423 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 TRIM10Q9UDY6 481 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 DUSP10Q9Y6W6 482 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 NCANO14594 1321 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 PATJQ8NI35 1801 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 HIDE1A8MVS5 230 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 E5RJQ4 531 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 F8VP50 259 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 ATF2P15336 505 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 ADCY1Q08828 1119 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 KLHL5Q96PQ7 755 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 TSGA10Q9BZW7 698 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 STRIP2Q9ULQ0 834 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 PCDHGC5Q9Y5F6 944 aa28.55■■■□□ 2.16
SSBP4-202ENST00000348495 TCRBV5S1A1TA0A578 114 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 HAPLN1P10915 354 aaPredicted RBP28.54■■■□□ 2.16
SSBP4-202ENST00000348495 IRS1P35568 1242 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 ACADSBP45954 432 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 DUSP4Q13115 394 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 TCEAL1Q15170 157 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 RAB41Q5JT25 222 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 CYP4A22Q5TCH4 519 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 PLPP4Q5VZY2 271 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 IPO4Q8TEX9 1081 aaKnown RBP28.54■■■□□ 2.16
SSBP4-202ENST00000348495 ARNTL2Q8WYA1 636 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 C8orf48Q96LL4 319 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 LZTFL1Q9NQ48 299 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 CNOT8Q9UFF9 292 aaKnown RBP28.54■■■□□ 2.16
SSBP4-202ENST00000348495 MAFFQ9ULX9 164 aa28.54■■■□□ 2.16
SSBP4-202ENST00000348495 A0A0A6YYK5 440 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-202ENST00000348495 A0A1W2PPC1 479 aa28.53■■■□□ 2.16
SSBP4-202ENST00000348495 ATMINO43313 823 aaPredicted RBP28.53■■■□□ 2.16
SSBP4-202ENST00000348495 GRIK1P39086 918 aa28.53■■■□□ 2.16
SSBP4-202ENST00000348495 LLGL2Q6P1M3 1020 aa28.53■■■□□ 2.16
SSBP4-202ENST00000348495 XYLT1Q86Y38 959 aa28.53■■■□□ 2.16
SSBP4-202ENST00000348495 MIS12Q9H081 205 aa28.53■■■□□ 2.16
SSBP4-202ENST00000348495 SALL4Q9UJQ4 1053 aa28.53■■■□□ 2.16
SSBP4-202ENST00000348495 SLC27A5Q9Y2P5 690 aa28.53■■■□□ 2.16
SSBP4-202ENST00000348495 TRIM66O15016 1216 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 KRT86O43790 486 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 SNX16P57768 344 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 LIN9Q5TKA1 542 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 PLEKHA7Q6IQ23 1121 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 PDE12Q6L8Q7 609 aaKnown RBP28.52■■■□□ 2.16
SSBP4-202ENST00000348495 GPRIN1Q7Z2K8 1008 aa28.52■■■□□ 2.16
SSBP4-202ENST00000348495 RFFLQ8WZ73 363 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms