RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 MTHFD1LQ6UB35 978 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ERLEC1Q96DZ1 483 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 PLA2G12BQ9BX93 195 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 GBA2Q9HCG7 927 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 SPTLC1O15269 473 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 PSMD3O43242 534 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ADCY6O43306 1168 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 CNPP09543 421 aaKnown RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 BCAP31P51572 246 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ALX1Q15699 326 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 CPA4Q9UI42 421 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 AGO2Q9UKV8 859 aaKnown RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 NCF1BA6NI72 391 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 NCF1CA8MVU1 366 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 GH1P01241 217 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 NCF1P14598 390 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ARHGDIBP52566 201 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 FCGRTP55899 365 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 DMPKQ09013 629 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 NDUFAF6Q330K2 333 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 KCNV1Q6PIU1 500 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 AKAP7Q9P0M2 348 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 CCDC189A1A4V9 331 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ZNF500O60304 480 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 FGRP09769 529 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 PDHA2P29803 388 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 CDK20Q8IZL9 346 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 RAD54LQ92698 747 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 SNF8Q96H20 258 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 CAMKK2Q96RR4 588 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 CLCC1Q96S66 551 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM39Q9HCM9 518 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ZNF624Q9P2J8 865 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 LBPP18428 481 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 STIP1P31948 543 aaKnown RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 RSBN1Q5VWQ0 802 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 PROSER1Q86XN7 944 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 SNRNP27Q8WVK2 155 aaKnown RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 BTBD9Q96Q07 612 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 CENPXA8MT69 81 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 MAGEA10P43363 369 aaPredicted RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 ACOT2P49753 483 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 PGBD2Q6P3X8 592 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 B3GALNT2Q8NCR0 500 aa12.23□□□□□ -0.45
TRAF3-201ENST00000347662 TRIT1Q9H3H1 467 aaKnown RBP12.23□□□□□ -0.45
TRAF3-201ENST00000347662 MADDQ8WXG6 1647 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 ITSN1Q15811 1721 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 NR3C2P08235 984 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 VAMP7P51809 220 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 ORC2Q13416 577 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-201ENST00000347662 CDH18Q13634 790 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 PDZK1Q5T2W1 519 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 NBPF12Q5TAG4 269 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-201ENST00000347662 MTSS1LQ765P7 747 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 RNF44Q7L0R7 432 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 CCDC185Q8N715 623 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 KATNAL1Q9BW62 490 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 FER1L4A9Z1Z3 1794 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 AP3B1O00203 1094 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 TRIM24O15164 1050 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 IER5Q5VY09 327 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 NFRKBQ6P4R8 1299 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 LRRC8DQ7L1W4 858 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 DSG4Q86SJ6 1040 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 AGBL3Q8NEM8 1001 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 NEK7Q8TDX7 302 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 C1orf54Q8WWF1 131 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 PRMT1Q99873 361 aaKnown RBP12.22□□□□□ -0.45
TRAF3-201ENST00000347662 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 RGS7P49802 495 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 CCR4P51679 360 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 CYP24A1Q07973 514 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 PLA2G4FQ68DD2 849 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 RNF180Q86T96 592 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 IPMKQ8NFU5 416 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 TRPC4APQ8TEL6 797 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 TNIP3Q96KP6 325 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 RHOBTB2Q9BYZ6 727 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 KIAA1586Q9HCI6 787 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 LCMT1Q9UIC8 334 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 PIK3CDO00329 1044 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 VWA5AO00534 786 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 RGL2O15211 777 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 ZCCHC8Q6NZY4 707 aaKnown RBP12.22□□□□□ -0.45
TRAF3-201ENST00000347662 KIAA0408Q6ZU52 694 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 SCAIQ8N9R8 606 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 ROGDIQ9GZN7 287 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 MAFFQ9ULX9 164 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 CPS1P31327 1500 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 GUCY1B2O75343 617 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 NDUFA10O95299 355 aa12.22□□□□□ -0.45
TRAF3-201ENST00000347662 ECDO95905 644 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-201ENST00000347662 IL6P05231 212 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms