RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ASNSD1Q9NWL6 643 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 MTUS1Q9ULD2 1270 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 MICAL3Q7RTP6 2002 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 MYBPHLA2RUH7 354 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 GABBR2O75899 941 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 CLTBP09497 229 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 RFC2P35250 354 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 CLCN6P51797 869 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 HADHQ16836 314 aaKnown RBP22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 INTS6LQ5JSJ4 861 aaKnown RBP22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 DEFB128Q7Z7B8 93 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 FAM35AQ86V20 835 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 SCUBE3Q8IX30 993 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 KCTD13Q8WZ19 329 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 CNPY3Q9BT09 278 aa22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 MRPL9Q9BYD2 267 aaKnown RBP22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 DDX56Q9NY93 547 aaKnown RBP22.57■■□□□ 1.2
TSPAN3-202ENST00000346495 C2CD4BA6NLJ0 364 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 TRAPPC3O43617 180 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 RNF8O76064 485 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 ZRANB2O95218 330 aaKnown RBP eCLIP22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 GJC1P36383 396 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 CETN2P41208 172 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 CTCFP49711 727 aaPredicted RBP22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 VSNL1P62760 191 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 CCDC142Q17RM4 750 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 POLNQ7Z5Q5 900 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 PIGZQ86VD9 579 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 CRIPAKQ8N1N5 446 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 MAIP1Q8WWC4 291 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 RXFP2Q8WXD0 754 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 PCED1BQ96HM7 432 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 PAWRQ96IZ0 340 aaKnown RBP22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 RBM41Q96IZ5 413 aaKnown RBP22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 NRDE2Q9H7Z3 1164 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 DNAJB4Q9UDY4 337 aa22.56■■□□□ 1.2
TSPAN3-202ENST00000346495 F8W810 466 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 DPYSL4O14531 572 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 FSCN2O14926 492 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 ERLIN1O75477 346 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 LCP1P13796 627 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 PDGFRAP16234 1089 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 MAPRE1Q15691 268 aaKnown RBP22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 FAM171BQ6P995 826 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 CNKSR3Q6P9H4 555 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 CLEC20AQ6ZU45 233 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 ADAT2Q7Z6V5 191 aaKnown RBP22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 RCOR2Q8IZ40 523 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 CCDC26Q8TAB7 109 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 PIWIL1Q96J94 861 aaKnown RBP22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 DDX47Q9H0S4 455 aaKnown RBP22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 KRT82Q9NSB4 513 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 STIM2Q9P246 746 aa22.55■■□□□ 1.2
TSPAN3-202ENST00000346495 SART1O43290 800 aaKnown RBP22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 LRCH4O75427 683 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 TADA2AO75478 443 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 AP1G2O75843 785 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 KRT7P08729 469 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 DESP17661 470 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 YWHAHQ04917 246 aaPredicted RBP22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 IKBKEQ14164 716 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 TMCO3Q6UWJ1 677 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 SLC26A9Q7LBE3 791 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 ARCQ7LC44 396 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 CCDC50Q8IVM0 306 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 HDAC7Q8WUI4 952 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 SMARCD1Q96GM5 515 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 COLEC11Q9BWP8 271 aa22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 PRG3Q9Y2Y8 225 aaPredicted RBP22.54■■□□□ 1.2
TSPAN3-202ENST00000346495 TCF4P15884 667 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 PCK1P35558 622 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 GATMP50440 423 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 TSPY1Q01534 308 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 SLC7A5Q01650 507 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 SMC1AQ14683 1233 aaKnown RBP22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 ODF2Q5BJF6 829 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 EFHC1Q5JVL4 640 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 ZFYVE27Q5T4F4 411 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 HNRNPLLQ8WVV9 542 aaKnown RBP22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 KHSRPQ92945 711 aaKnown RBP eCLIP22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 MYLPFQ96A32 169 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 NCAPGQ9BPX3 1015 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 TMEM175Q9BSA9 504 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 UBXN6Q9BZV1 441 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 LRRC4Q9HBW1 653 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 DMGDHQ9UI17 866 aaKnown RBP22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 NR2E1Q9Y466 385 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 FNDC1Q4ZHG4 1894 aaPredicted RBP22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 BRCA2P51587 3418 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 NRP1O14786 923 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 RAD51CO43502 376 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 PHF2O75151 1096 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 GRAP2O75791 330 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 BEST1O76090 585 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 KRT1P04264 644 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 ALDH2P05091 517 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 FLT3P36888 993 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 MAP3K7CLP57077 242 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 COPS2P61201 443 aa22.53■■□□□ 1.2
TSPAN3-202ENST00000346495 SLC25A11Q02978 314 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms