RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 HVCN1Q96D96 273 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 ZBED3Q96IU2 234 aaPredicted RBP13.92□□□□□ -0.18
CASC4-202ENST00000345795 VPS11Q9H270 941 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 NINJ2Q9NZG7 142 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 SYNPO2Q9UMS6 1093 aa13.92□□□□□ -0.18
CASC4-202ENST00000345795 COL22A1Q8NFW1 1626 aaPredicted RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 IL1R2P27930 398 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 RBL1P28749 1068 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 SLC1A1P43005 524 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 CLUL1Q15846 466 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 PCSK7Q16549 785 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 WSCD1Q658N2 575 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 ANKS1BQ7Z6G8 1248 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 PGBD4Q96DM1 585 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 TPX2Q9ULW0 747 aaKnown RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 FAM155BO75949 473 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 MYBL1P10243 752 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 NDUFV1P49821 464 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 EIF3BP55884 814 aaKnown RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 MYBPC2Q14324 1141 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 HEATR6Q6AI08 1181 aaKnown RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 RAPH1Q70E73 1250 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 MIB1Q86YT6 1006 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 KIRREL3Q8IZU9 778 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 SDCBP2Q9H190 292 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 ABI2Q9NYB9 513 aaPredicted RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 SNX10Q9Y5X0 201 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 AARSP49588 968 aaKnown RBP eCLIP13.91□□□□□ -0.18
CASC4-202ENST00000345795 PEX5P50542 639 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 SCNN1GP51170 649 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 GTF2A1P52655 376 aaPredicted RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 ATXN3P54252 364 aaPredicted RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 PIGHQ14442 188 aaPredicted RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 GEN1Q17RS7 908 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 ANKRD22Q5VYY1 191 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 PMF1Q6P1K2 205 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 NOTUMQ6P988 496 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 MTHFD1LQ6UB35 978 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 ZPBP2Q6X784 338 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 ZNF662Q6ZS27 426 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 FAM193BQ96PV7 902 aaPredicted RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 FERMT1Q9BQL6 677 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 PCMTD2Q9NV79 361 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 DDIT4Q9NX09 232 aa13.91□□□□□ -0.18
CASC4-202ENST00000345795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.91□□□□□ -0.18
CASC4-202ENST00000345795 DIS3Q9Y2L1 958 aaKnown RBP13.91□□□□□ -0.18
CASC4-202ENST00000345795 NCANO14594 1321 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 CYB561D2O14569 222 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 TFE3P19532 575 aaPredicted RBP13.9□□□□□ -0.18
CASC4-202ENST00000345795 ITIH2P19823 946 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 PBX3P40426 434 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 IL9RQ01113 521 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 PPIL2Q13356 520 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 APBB1IPQ7Z5R6 666 aaPredicted RBP13.9□□□□□ -0.18
CASC4-202ENST00000345795 PCGF5Q86SE9 256 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 CYP4X1Q8N118 509 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 RYBPQ8N488 228 aaPredicted RBP13.9□□□□□ -0.18
CASC4-202ENST00000345795 NPLOC4Q8TAT6 608 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 UPF1Q92900 1129 aaKnown RBP eCLIP13.9□□□□□ -0.18
CASC4-202ENST00000345795 A0A1W2PPM1 405 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 MAGEB2O15479 319 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 ENDOD1O94919 500 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 MMP8P22894 467 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 ANKRD20A3Q5VUR7 823 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 PIK3R5Q8WYR1 880 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 LGMNQ99538 433 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 NTPCRQ9BSD7 190 aaKnown RBP13.9□□□□□ -0.18
CASC4-202ENST00000345795 STXBP5LQ9Y2K9 1186 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
CASC4-202ENST00000345795 A0A0G2JLL6 359 aaPredicted RBP13.9□□□□□ -0.19
CASC4-202ENST00000345795 LRCH4O75427 683 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 HOXC6P09630 235 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 OR4Q2P0C623 313 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 PHBP35232 272 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 OLIG2Q13516 323 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 FBXO47Q5MNV8 452 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 MON1BQ7L1V2 547 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 PRRT2Q7Z6L0 340 aaPredicted RBP13.9□□□□□ -0.19
CASC4-202ENST00000345795 FAM111AQ96PZ2 611 aa13.9□□□□□ -0.19
CASC4-202ENST00000345795 NFASCO94856 1347 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 NHSQ6T4R5 1651 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 TSPAN3O60637 253 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 UNGP13051 313 aaPredicted RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 ELK3P41970 407 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 OR1G1P47890 313 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 LMNB2Q03252 620 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 MBTD1Q05BQ5 628 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 KCNV1Q6PIU1 500 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 PDCD6IPQ8WUM4 868 aaKnown RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 SLITRK1Q96PX8 696 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 DDX20Q9UHI6 824 aaKnown RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 CPSF3Q9UKF6 684 aaKnown RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 TRIM33Q9UPN9 1127 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 CFAP69A5D8W1 941 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms