RNA–Protein interactions for RNA: ENST00000345317.6

SKAP2-201, Transcript of src kinase associated phosphoprotein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKAP2, Length 3,998 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-201ENST00000345317 CAPNS2Q96L46 248 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 RBM15Q96T37 977 aaKnown RBP eCLIP9.07□□□□□ -0.96
SKAP2-201ENST00000345317 FZD8Q9H461 694 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 RAB6BQ9NRW1 208 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 TRMT13Q9NUP7 481 aaKnown RBP9.07□□□□□ -0.96
SKAP2-201ENST00000345317 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.07□□□□□ -0.96
SKAP2-201ENST00000345317 BAIAP2L1Q9UHR4 511 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 FAM187AA6NFU0 413 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 KIF3CO14782 793 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 HOXC6P09630 235 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 SLMAPQ14BN4 828 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 RUNDC3BQ96NL0 473 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 ELOVL4Q9GZR5 314 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 SEMA4AQ9H3S1 761 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 IFT122Q9HBG6 1241 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 KRT82Q9NSB4 513 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 HOMER3Q9NSC5 361 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 ITGA11Q9UKX5 1188 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 USP18Q9UMW8 372 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 MYH15Q9Y2K3 1946 aa9.07□□□□□ -0.96
SKAP2-201ENST00000345317 SMIM28A0A1B0GU29 152 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 GPR182O15218 404 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 FAM200BP0CF97 657 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 CCL23P55773 120 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 INHBEP58166 350 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 ROR1Q01973 937 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 ITIH3Q06033 890 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 C1QBPQ07021 282 aaKnown RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 MMRN1Q13201 1228 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 TAF2Q6P1X5 1199 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SAPCD2Q86UD0 394 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 KIRREL3Q8IZU9 778 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 LRRC57Q8N9N7 239 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 RAPGEF5Q92565 580 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 BHMTQ93088 406 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 HES6Q96HZ4 224 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 KLF6Q99612 283 aaPredicted RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SEPT5Q99719 369 aaPredicted RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 C16orf70Q9BSU1 422 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 DPEP3Q9H4B8 488 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SAMD15Q9P1V8 674 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 KLHL8Q9P2G9 620 aaPredicted RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 WDR35Q9P2L0 1181 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 DNPEPQ9ULA0 475 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 STAP1Q9ULZ2 295 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 IPPQ9Y573 584 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 PCDHA3Q9Y5H8 950 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 COMMD10Q9Y6G5 202 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 NT5C1B-RDH14C9J2C7 533 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 BNIP3LO60238 219 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 STBD1O95210 358 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 MIPP30301 263 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 FLT3P36888 993 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 BRCC3P46736 316 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 RPL21P46778 160 aaKnown RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SESN2P58004 480 aaPredicted RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 ZBTB16Q05516 673 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 DEUP1Q05D60 604 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 IFT88Q13099 833 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 GRB14Q14449 540 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 C11orf63Q6NUN7 778 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 RASAL3Q86YV0 1011 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SPATA2LQ8IUW3 424 aaPredicted RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 PRELID2Q8N945 189 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 MDM1Q8TC05 714 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 FBXL18Q96ME1 805 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 DDIT4Q9NX09 232 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 FLRT1Q9NZU1 646 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 RAB21Q9UL25 225 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 ZNF831Q5JPB2 1677 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SPAG7O75391 227 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 TCF4P15884 667 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 CENPUQ71F23 418 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 URGCPQ8TCY9 931 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 HNRNPLLQ8WVV9 542 aaKnown RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 TBC1D31Q96DN5 1066 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SENP8Q96LD8 212 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 TACO1Q9BSH4 297 aaKnown RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 GPR88Q9GZN0 384 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 RNF208Q9H0X6 261 aa9.06□□□□□ -0.96
SKAP2-201ENST00000345317 R3HDM2Q9Y2K5 976 aaKnown RBP9.06□□□□□ -0.96
SKAP2-201ENST00000345317 SOCS7O14512 581 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 LGR5O75473 907 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 CPP00450 1065 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 NOGQ13253 232 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 MGAT5BQ3V5L5 792 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 BTBD8Q5XKL5 378 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 SPOCD1Q6ZMY3 1216 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 MIB1Q86YT6 1006 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 BBOF1Q8ND07 529 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 SMC1BQ8NDV3 1235 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 MIEF2Q96C03 454 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 ATXN7L3BQ96GX2 97 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 ALG13Q9NP73 1137 aaKnown RBP9.05□□□□□ -0.96
SKAP2-201ENST00000345317 DDX56Q9NY93 547 aaKnown RBP9.05□□□□□ -0.96
SKAP2-201ENST00000345317 COQ4Q9Y3A0 265 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 MYADML2A6NDP7 307 aa9.05□□□□□ -0.96
SKAP2-201ENST00000345317 SCAMP3O14828 347 aaKnown RBP9.05□□□□□ -0.96
SKAP2-201ENST00000345317 B4GALT4O60513 344 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms