RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 XPAP23025 273 aaPredicted RBP18.73■□□□□ 0.59
SMC4-201ENST00000344722 SLC1A6P48664 564 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 CUL2Q13617 745 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 CATSPER4Q7RTX7 472 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 NLGN1Q8N2Q7 840 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 CCDC126Q96EE4 140 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 ECSITQ9BQ95 431 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 PLGRKTQ9HBL7 147 aa18.73■□□□□ 0.59
SMC4-201ENST00000344722 EXOSC4Q9NPD3 245 aaKnown RBP18.73■□□□□ 0.59
SMC4-201ENST00000344722 COL3A1P02461 1466 aaPredicted RBP18.72■□□□□ 0.59
SMC4-201ENST00000344722 HEATR9A2RTY3 570 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 DFFAO00273 331 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 SERPINE1P05121 402 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 MOXD1Q6UVY6 613 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 ZCCHC9Q8N567 271 aaKnown RBP18.72■□□□□ 0.59
SMC4-201ENST00000344722 NAT9Q9BTE0 207 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 SP110Q9HB58 689 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 TNPO2O14787 897 aaKnown RBP18.72■□□□□ 0.59
SMC4-201ENST00000344722 TIMM44O43615 452 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 MED24O75448 989 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 KRT36O76013 467 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 CACNB3P54284 484 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 DMPKQ09013 629 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 PDK3Q15120 406 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 CLEC16AQ2KHT3 1053 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 TAF2Q6P1X5 1199 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 EEPD1Q7L9B9 569 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 DNAAF5Q86Y56 855 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 FLAD1Q8NFF5 587 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 DLG3Q92796 817 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 RIT2Q99578 217 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 NDNQ99608 321 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 NIF3L1Q9GZT8 377 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMC4-201ENST00000344722 PCYOX1Q9UHG3 505 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 ANPEPP15144 967 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 ZCCHC7Q8N3Z6 543 aaKnown RBP18.72■□□□□ 0.59
SMC4-201ENST00000344722 KLHL23Q8NBE8 558 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 RFWD2Q8NHY2 731 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 SLC5A5Q92911 643 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 TTKP33981 857 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 BLMHQ13867 455 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 FAM83EQ2M2I3 478 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 COBLL1Q53SF7 1204 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 GCNAQ96QF7 691 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 COPG1Q9Y678 874 aaKnown RBP18.72■□□□□ 0.59
SMC4-201ENST00000344722 V9GYQ6 96 aa18.72■□□□□ 0.59
SMC4-201ENST00000344722 LMTK2Q8IWU2 1503 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 SDR42E2A6NKP2 422 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 MUTP22033 750 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 RPL10AP62906 217 aaKnown RBP18.71■□□□□ 0.59
SMC4-201ENST00000344722 LUZP2Q86TE4 346 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 TAGAPQ8N103 731 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 TRIM62Q9BVG3 475 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 TCF7L2Q9NQB0 619 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 MPP6Q9NZW5 540 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 COL15A1P39059 1388 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 CLASP2O75122 1294 aaKnown RBP18.71■□□□□ 0.59
SMC4-201ENST00000344722 SOX11P35716 441 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 PBX1P40424 430 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 NR1H2P55055 460 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 RAB14P61106 215 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 STX19Q8N4C7 294 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 SRPK1Q96SB4 655 aaKnown RBP18.71■□□□□ 0.59
SMC4-201ENST00000344722 CASS4Q9NQ75 786 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 FAM205AQ6ZU69 1335 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 RRM1P23921 792 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 ADRA1DP25100 572 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 RPA3P35244 121 aaPredicted RBP18.71■□□□□ 0.59
SMC4-201ENST00000344722 PTGER2P43116 358 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 MYBPC2Q14324 1141 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 LDHDQ86WU2 507 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 ZFYVE19Q96K21 471 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 CNPY3Q9BT09 278 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 SRP68Q9UHB9 627 aaKnown RBP18.71■□□□□ 0.59
SMC4-201ENST00000344722 MTSS1O43312 755 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 CCNA1P78396 465 aa18.71■□□□□ 0.59
SMC4-201ENST00000344722 TFB1MQ8WVM0 346 aaKnown RBP18.71■□□□□ 0.59
SMC4-201ENST00000344722 EEF2KO00418 725 aaKnown RBP18.7■□□□□ 0.58
SMC4-201ENST00000344722 FASP25445 335 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 CHRNB3Q05901 458 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 CYP4A22Q5TCH4 519 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 PYDC1Q8WXC3 89 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 STK32BQ9NY57 414 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 NYAP2Q9P242 653 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 TSPY1Q01534 308 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 UBE3AQ05086 875 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 CEP78Q5JTW2 689 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 DHDDSQ86SQ9 333 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 USP13Q92995 863 aaPredicted RBP18.7■□□□□ 0.58
SMC4-201ENST00000344722 COQ7Q99807 217 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 C1orf50Q9BV19 199 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 ZSCAN9O15535 394 aaPredicted RBP18.7■□□□□ 0.58
SMC4-201ENST00000344722 PHGDHO43175 533 aaKnown RBP18.7■□□□□ 0.58
SMC4-201ENST00000344722 C21orf2O43822 256 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 PRKCBP05771 671 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 ME2P23368 584 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 ALDH1A3P47895 512 aa18.7■□□□□ 0.58
SMC4-201ENST00000344722 PDK4Q16654 411 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms