RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 OBSL1O75147 1896 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 MAGEA11P43364 429 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 MYL6P60660 151 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 STK4Q13043 487 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 PSMD2Q13200 908 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 BMT2Q1RMZ1 405 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 IL31Q6EBC2 164 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 FAM171BQ6P995 826 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 VSTM1Q6UX27 236 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 TMEM150AQ86TG1 271 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 KBTBD7Q8WVZ9 684 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 ZNF516Q92618 1163 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 ATP2A3Q93084 1043 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 SYAP1Q96A49 352 aaPredicted RBP13.25□□□□□ -0.29
SGCA-202ENST00000344627 ZC3H10Q96K80 434 aaKnown RBP13.25□□□□□ -0.29
SGCA-202ENST00000344627 PKMYT1Q99640 499 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 MRPL45Q9BRJ2 306 aaKnown RBP13.25□□□□□ -0.29
SGCA-202ENST00000344627 RBM12Q9NTZ6 932 aaKnown RBP13.25□□□□□ -0.29
SGCA-202ENST00000344627 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 ATP6V1DQ9Y5K8 247 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 MYH10P35580 1976 aa13.25□□□□□ -0.29
SGCA-202ENST00000344627 ANAPC1Q9H1A4 1944 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 TRAV19A0A0A6YYK7 116 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.24□□□□□ -0.29
SGCA-202ENST00000344627 A8MXQ7 604 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 KLRC4O43908 158 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 RPP40O75818 363 aaKnown RBP13.24□□□□□ -0.29
SGCA-202ENST00000344627 EPN2O95208 641 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 ABL1P00519 1130 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 RPN1P04843 607 aaKnown RBP13.24□□□□□ -0.29
SGCA-202ENST00000344627 CKMP06732 381 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 ZNF806P0C7X5 589 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 NDUFA8P51970 172 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 Q6ZS52 159 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 SYT13Q7L8C5 426 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 C12orf56Q8IXR9 622 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 FAM160A2Q8N612 972 aaPredicted RBP13.24□□□□□ -0.29
SGCA-202ENST00000344627 C12orf50Q8NA57 414 aaPredicted RBP13.24□□□□□ -0.29
SGCA-202ENST00000344627 KIAA0895Q8NCT3 520 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 OSCP1Q8WVF1 389 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 USP13Q92995 863 aaPredicted RBP13.24□□□□□ -0.29
SGCA-202ENST00000344627 SPATA17Q96L03 361 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 EBF3Q9H4W6 596 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 CRTAC1Q9NQ79 661 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 EBF1Q9UH73 591 aa13.24□□□□□ -0.29
SGCA-202ENST00000344627 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 GPR179Q6PRD1 2367 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 CALUO43852 315 aaPredicted RBP13.23□□□□□ -0.29
SGCA-202ENST00000344627 RHOBTB1O94844 696 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 CCDC192P0DO97 292 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 PTPN1P18031 435 aaKnown RBP13.23□□□□□ -0.29
SGCA-202ENST00000344627 ATICP31939 592 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 RAP1GAPP47736 663 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 IFNAR2P48551 515 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 MTF1Q14872 753 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 ELF2Q15723 593 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 TRIM68Q6AZZ1 485 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 SCARA5Q6ZMJ2 495 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 ARL14EPQ8N8R7 260 aaPredicted RBP13.23□□□□□ -0.29
SGCA-202ENST00000344627 MYCBPAPQ8TBZ2 947 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 CYP2S1Q96SQ9 504 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 P2RY13Q9BPV8 354 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 MED10Q9BTT4 135 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 ECT2Q9H8V3 914 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 HPS4Q9NQG7 708 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 FRMD4BQ9Y2L6 1034 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 ZDHHC9Q9Y397 364 aa13.23□□□□□ -0.29
SGCA-202ENST00000344627 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.23□□□□□ -0.29
SGCA-202ENST00000344627 PTPRDP23468 1912 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 DCDC2BA2VCK2 349 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 LRRIQ3A6PVS8 624 aaPredicted RBP13.22□□□□□ -0.29
SGCA-202ENST00000344627 CLDN5O00501 218 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 TRIM66O15016 1216 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 TACC1O75410 805 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 KIF20AO95235 890 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 NFATC1O95644 943 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 NR3C1P04150 777 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 MYL1P05976 194 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 ARSAP15289 507 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 HDCP19113 662 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 AP3M2P53677 418 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 CDH8P55286 799 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 IFRD2Q12894 506 aaPredicted RBP13.22□□□□□ -0.29
SGCA-202ENST00000344627 NCOA4Q13772 614 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 KCNB1Q14721 858 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 LPAL2Q16609 132 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 HSF5Q4G112 596 aaPredicted RBP13.22□□□□□ -0.29
SGCA-202ENST00000344627 AASDHQ4L235 1098 aaPredicted RBP13.22□□□□□ -0.29
SGCA-202ENST00000344627 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 DENND5BQ6ZUT9 1274 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 LIMS2Q7Z4I7 341 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 B3GALNT2Q8NCR0 500 aa13.22□□□□□ -0.29
SGCA-202ENST00000344627 PARD3BQ8TEW8 1205 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms