RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ANKRD20A8PQ5CZ79 823 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 PPM1LQ5SGD2 360 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 FOXR2Q6PJQ5 311 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 CTAGE6Q86UF2 777 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 TMC8Q8IU68 726 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 WDR75Q8IWA0 830 aaKnown RBP7.78□□□□□ -1.16
ZNF540-202ENST00000343599 CTAGE4Q8IX94 777 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 OXR1Q8N573 874 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 SMYD1Q8NB12 490 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ADAMTS14Q8WXS8 1223 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 P3H4Q92791 437 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 ANKRD27Q96NW4 1050 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 MYH11P35749 1972 aa7.78□□□□□ -1.16
ZNF540-202ENST00000343599 LARGE1O95461 756 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 PDCP20941 246 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 ALDH3A1P30838 453 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 CCNG1P51959 295 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 ELF3P78545 371 aaPredicted RBP7.77□□□□□ -1.16
ZNF540-202ENST00000343599 ST3GAL1Q11201 340 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 UPP1Q16831 310 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 ARHGAP15Q53QZ3 475 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 LIN9Q5TKA1 542 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 CD300LGQ6UXG3 332 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 GET4Q7L5D6 327 aaPredicted RBP7.77□□□□□ -1.16
ZNF540-202ENST00000343599 ERMNQ8TAM6 284 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 TMC2Q8TDI7 906 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 SMG7Q92540 1137 aaKnown RBP7.77□□□□□ -1.16
ZNF540-202ENST00000343599 NACC1Q96RE7 527 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 PNPLA8Q9NP80 782 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 PCMTD2Q9NV79 361 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 SEL1LQ9UBV2 794 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 IPPQ9Y573 584 aa7.77□□□□□ -1.16
ZNF540-202ENST00000343599 TP53BP1Q12888 1972 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 TEX28O15482 410 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 ARP10275 920 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 KLRC2P26717 231 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 OXTRP30559 389 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 AMPD3Q01432 767 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 MCL1Q07820 350 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 TMEM62Q0P6H9 643 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 INAVAQ3KP66 663 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC121Q6ZUS5 278 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 VSTM4Q8IW00 320 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 NPAS3Q8IXF0 933 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 TTC39CQ8N584 583 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 GSTCDQ8NEC7 633 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 PSMG2Q969U7 264 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 AK8Q96MA6 479 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 DDX56Q9NY93 547 aaKnown RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 SCML1Q9UN30 329 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 SNX14Q9Y5W7 946 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 CHD5Q8TDI0 1954 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 HIDE1A8MVS5 230 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 FAM86B1E9PN63 330 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 MAPK13O15264 365 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 IL18RAPO95256 599 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 APBB3O95704 486 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 VIMP08670 466 aaKnown RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 FAM86B2P0C5J1 330 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 RPA1P27694 616 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 MARCKSP29966 332 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 NAPAP54920 295 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 UCNP55089 124 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 TBX2Q13207 712 aaPredicted RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 NCAPHQ15003 741 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 RARS2Q5T160 578 aaKnown RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 DAB2IPQ5VWQ8 1189 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 TOGARAM2Q6ZUX3 1019 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 MIER3Q7Z3K6 550 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 PDZD8Q8NEN9 1154 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 IFT43Q96FT9 208 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 CDK5RAP1Q96SZ6 601 aaKnown RBP7.77□□□□□ -1.17
ZNF540-202ENST00000343599 RABEP2Q9H5N1 569 aa7.77□□□□□ -1.17
ZNF540-202ENST00000343599 A0A1B0GVL5 298 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 BCLAF3A2AJT9 711 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ARL5CA6NH57 179 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CBFA2T2O43439 604 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 TGM5O43548 720 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 KIF5CO60282 957 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 GAS7O60861 476 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 ZNF189O75820 626 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 FAM107AO95990 144 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 S100BP04271 92 aaPredicted RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 LSP1P33241 339 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CXCL12P48061 93 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 HARS2P49590 506 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 SLC7A9P82251 487 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 LAMTOR4Q0VGL1 99 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 IFT88Q13099 833 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 MAPRE1Q15691 268 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 NFIL3Q16649 462 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 KBTBD12Q3ZCT8 623 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 LARP1BQ659C4 914 aaKnown RBP7.76□□□□□ -1.17
ZNF540-202ENST00000343599 HAUS3Q68CZ6 603 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 KDM7AQ6ZMT4 941 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 Q6ZUG5 572 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC80Q76M96 950 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 LCA5Q86VQ0 697 aa7.76□□□□□ -1.17
ZNF540-202ENST00000343599 CCDC83Q8IWF9 413 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms