RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FAM13CQ8NE31 585 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 RXFP2Q8WXD0 754 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 PAK5Q9P286 719 aa12.94□□□□□ -0.34
SNRNP48-201ENST00000342415 ZMPSTE24O75844 475 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 FOXN2P32314 431 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 DSG3P32926 999 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 ABCD1P33897 745 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 TCF7P36402 384 aaPredicted RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 SERPINB5P36952 375 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 GTF2BQ00403 316 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 IL1RL1Q01638 556 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 SPIRE1Q08AE8 756 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 FOXD4Q12950 439 aaPredicted RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 C15orf59Q2T9L4 293 aaPredicted RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 ANO5Q75V66 913 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 ACOT1Q86TX2 421 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 TRABD2AQ86V40 505 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 SEPT1Q8WYJ6 367 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 P2RX7Q99572 595 aaKnown RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 BTBD10Q9BSF8 475 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 IDI2Q9BXS1 227 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 ZCWPW1Q9H0M4 648 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 PCDH9Q9HC56 1237 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 LIASO43766 372 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 MT-CO1P00395 513 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 GPD1P21695 349 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 TNFSF9P41273 254 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 LACTB2Q53H82 288 aaPredicted RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 FSCBQ5H9T9 825 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 IYDQ6PHW0 289 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 HACE1Q8IYU2 909 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 RFWD2Q8NHY2 731 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 PYDC1Q8WXC3 89 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 NMD3Q96D46 503 aaKnown RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 SLC24A2Q9UI40 661 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 UMODL1Q5DID0 1318 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 ARFGEF2Q9Y6D5 1785 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 IGLV3-22A0A075B6J6 115 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 MGRN1O60291 552 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 TXNP10599 105 aaKnown RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 EFNA5P52803 228 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 CNTN2Q02246 1040 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 OLFML2BQ68BL8 750 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 FAM131BQ86XD5 332 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 DAW1Q8N136 415 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 HPDLQ96IR7 371 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 ZNF317Q96PQ6 595 aaPredicted RBP12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 CYP39A1Q9NYL5 469 aa12.93□□□□□ -0.34
SNRNP48-201ENST00000342415 TOPAZ1Q8N9V7 1692 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ASTN2O75129 1339 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 GLRA2P23416 452 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 RPL22P35268 128 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 BNIP1Q12981 228 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ZBTB41Q5SVQ8 909 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 EFCAB12Q6NXP0 572 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 SLC26A11Q86WA9 606 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ZNF280CQ8ND82 737 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ZNF669Q96BR6 464 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 TSR3Q9UJK0 312 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 FAM155BO75949 473 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 PGK2P07205 417 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 CFHP08603 1231 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ECHS1P30084 290 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 MIPP30301 263 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 PHKA2P46019 1235 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 PEX5P50542 639 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 DNAL1Q4LDG9 190 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 DCAF6Q58WW2 860 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 VSTM1Q6UX27 236 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 TRIM67Q6ZTA4 783 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 PIGWQ7Z7B1 504 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 SLC9A9Q8IVB4 645 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 CDKL3Q8IVW4 592 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 UBP1Q9NZI7 540 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 SHOC2Q9UQ13 582 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 RPS6KL1Q9Y6S9 549 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 GOLGA4Q13439 2230 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 GOLGA8TH3BQL2 631 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 HNRNPCL1O60812 293 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 AP1G2O75843 785 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 NPTXRO95502 500 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 SRGAP2BP0DMP2 458 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 NFIL3Q16649 462 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 KIF19Q2TAC6 998 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 NBPF12Q5TAG4 269 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 C6orf89Q6UWU4 347 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 CRELD2Q6UXH1 353 aaPredicted RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 LRRC74BQ6ZQY2 392 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ALYREFQ86V81 257 aaKnown RBP12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 IFNEQ86WN2 208 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 GLIS1Q8NBF1 620 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 HELQQ8TDG4 1101 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 BSNDQ8WZ55 320 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 CLPTM1LQ96KA5 538 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms