RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PTF1AQ7RTS3 328 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 FAM71AQ8IYT1 594 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 CNBD2Q96M20 576 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 LRGUKQ96M69 825 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 RILPQ96NA2 401 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 PHF12Q96QT6 1004 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 RUSC1Q9BVN2 902 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 CPVLQ9H3G5 476 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 AVENQ9NQS1 362 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-201ENST00000342245 APPL1Q9UKG1 709 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 DRG1Q9Y295 367 aaKnown RBP19.3■□□□□ 0.68
SMPD1-201ENST00000342245 ITGB4P16144 1822 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 KRT38O76015 456 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 ALDH18A1P54886 795 aaKnown RBP19.3■□□□□ 0.68
SMPD1-201ENST00000342245 GPX6P59796 221 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 TUBA4AP68366 448 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 HIF1AQ16665 826 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 RNASEH2BQ5TBB1 312 aaKnown RBP19.3■□□□□ 0.68
SMPD1-201ENST00000342245 ACAD10Q6JQN1 1059 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 POTEGQ6S5H5 508 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 TSPAN14Q8NG11 270 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 EME1Q96AY2 570 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 TRIM11Q96F44 468 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 KCNK16Q96T55 309 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 NEURL2Q9BR09 285 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 HERPUD2Q9BSE4 406 aa19.3■□□□□ 0.68
SMPD1-201ENST00000342245 UBAP1LF5GYI3 381 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 FAM155BO75949 473 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 THRAP10827 490 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 NFKBIAP25963 317 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 DCDC5Q6ZRR9 648 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 ARID3BQ8IVW6 561 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-201ENST00000342245 KATNAL2Q8IYT4 538 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 FBXW8Q8N3Y1 598 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 SDR42E2A6NKP2 422 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 SGPL1O95470 568 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 FDX1P10109 184 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 RBP3P10745 1247 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 NAT1P18440 290 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 ARSEP51690 589 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 AQP5P55064 265 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 IYDQ6PHW0 289 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 CAPN12Q6ZSI9 719 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 CATSPER3Q86XQ3 398 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 SLC9A9Q8IVB4 645 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 RHOT1Q8IXI2 618 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 APBB2Q92870 758 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 ATP6V0A1Q93050 837 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 GLT8D2Q9H1C3 349 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 GIT1Q9Y2X7 761 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 RABGAP1Q9Y3P9 1069 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 IKBKGQ9Y6K9 419 aa19.29■□□□□ 0.68
SMPD1-201ENST00000342245 ZNF536O15090 1300 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 GOLGA8RI6L899 631 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 C6orf222P0C671 652 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-201ENST00000342245 TRIM49P0CI25 452 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 TRIM49CP0CI26 452 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 SLC25A3Q00325 362 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 FMO1Q01740 532 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 GPS1Q13098 491 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 HSF5Q4G112 596 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-201ENST00000342245 ELMSAN1Q6PJG2 1045 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 EXD1Q8NHP7 514 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 E2F7Q96AV8 911 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 EFHD2Q96C19 240 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-201ENST00000342245 ACAP3Q96P50 834 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 HEPHQ9BQS7 1158 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 INO80BQ9C086 356 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-201ENST00000342245 FAM96AQ9H5X1 160 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 CNOT11Q9UKZ1 510 aaKnown RBP19.28■□□□□ 0.68
SMPD1-201ENST00000342245 FAM170AA1A519 330 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 LIASO43766 372 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 C8BP07358 591 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 CDH3P22223 829 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 EPHB1P54762 984 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 CMTM5Q96DZ9 223 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 SEL1LQ9UBV2 794 aa19.28■□□□□ 0.68
SMPD1-201ENST00000342245 SLIT2O94813 1529 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 CLUHO75153 1309 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 OXSR1O95747 527 aaPredicted RBP19.27■□□□□ 0.68
SMPD1-201ENST00000342245 STT3AP46977 705 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 RXRGP48443 463 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 TMPRSS15P98073 1019 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 TFDP1Q14186 410 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 SUSD4Q5VX71 490 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 MOXD1Q6UVY6 613 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 NSMFQ6X4W1 530 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 STARD8Q92502 1023 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 COA7Q96BR5 231 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 DYNLL2Q96FJ2 89 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 GPATCH1Q9BRR8 931 aaKnown RBP19.27■□□□□ 0.68
SMPD1-201ENST00000342245 HEMGNQ9BXL5 484 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 UNKQ9C0B0 810 aaKnown RBP19.27■□□□□ 0.68
SMPD1-201ENST00000342245 CDH7Q9ULB5 785 aa19.27■□□□□ 0.68
SMPD1-201ENST00000342245 CYP3A7-CYP3A51PA0A087WV96 503 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 E5RJQ4 531 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 H0YJX3 145 aa19.27■□□□□ 0.67
SMPD1-201ENST00000342245 MYL4P12829 197 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms