RNA–Protein interactions for RNA: ENST00000341866.3

LINC01164-201, Transcript of long intergenic non-protein coding RNA 1164, humanhuman

TSL 2 BASIC

Gene LINC01164, Length 3,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01164-201ENST00000341866 SIX1Q15475 284 aaPredicted RBP13.12□□□□□ -0.31
LINC01164-201ENST00000341866 SEPT7Q16181 437 aaKnown RBP13.12□□□□□ -0.31
LINC01164-201ENST00000341866 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 FAXCQ5TGI0 409 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 TAOK1Q7L7X3 1001 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 ANKLE1Q8NAG6 615 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 SHCBP1Q8NEM2 672 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 FEZF2Q8TBJ5 459 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 TFAP2BQ92481 460 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 TRAPPC9Q96Q05 1148 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 MYLK2Q9H1R3 596 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 PORCNQ9H237 461 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 DMAP1Q9NPF5 467 aaPredicted RBP13.12□□□□□ -0.31
LINC01164-201ENST00000341866 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
LINC01164-201ENST00000341866 SYNJ2BP-COX16A0A087WUM0 186 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 SPATA31C2B4DYI2 1134 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 ERFP50548 548 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 PSMC1P62191 440 aaKnown RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 NOMO3P69849 1222 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 TAF5Q15542 800 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 EAPPQ56P03 285 aaPredicted RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 SDCCAG8Q86SQ7 713 aaPredicted RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 LRRC8CQ8TDW0 803 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 GTF3C2Q8WUA4 911 aaPredicted RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 IFT43Q96FT9 208 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 DDX27Q96GQ7 796 aaKnown RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 MRPL47Q9HD33 250 aaKnown RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 NKIRAS1Q9NYS0 192 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 COX16Q9P0S2 106 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 ATXN10Q9UBB4 475 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 IGKV6D-21A0A0A0MT36 114 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 IGHA2P01877 340 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 VTNP04004 478 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 CETPP11597 493 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 PSMD6Q15008 389 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 SESTD1Q86VW0 696 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 C7orf31Q8N865 590 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 CCDC134Q9H6E4 229 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 AAASQ9NRG9 546 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 TXLNGQ9NUQ3 528 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 RBPJLQ9UBG7 517 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 SOCS7O14512 581 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 RFC1P35251 1148 aaPredicted RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 CCNFP41002 786 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 USP46P62068 366 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 LAMTOR4Q0VGL1 99 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 PDIA2Q13087 525 aaKnown RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 ART4Q93070 314 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 FAM136AQ96C01 138 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 HEXIM2Q96MH2 286 aaKnown RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 TGS1Q96RS0 853 aaKnown RBP13.11□□□□□ -0.31
LINC01164-201ENST00000341866 NINJ2Q9NZG7 142 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
LINC01164-201ENST00000341866 CD48P09326 243 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 FAM200BP0CF97 657 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 CCNB1P14635 433 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 OGDHQ02218 1023 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 DENND1BQ6P3S1 775 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 FASTKD5Q7L8L6 764 aaKnown RBP13.1□□□□□ -0.31
LINC01164-201ENST00000341866 ANKRD23Q86SG2 305 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 CCDC89Q8N998 374 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 SEPT1Q8WYJ6 367 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 NTPCRQ9BSD7 190 aaKnown RBP13.1□□□□□ -0.31
LINC01164-201ENST00000341866 TBC1D10AQ9BXI6 508 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 FAM49AQ9H0Q0 323 aaPredicted RBP13.1□□□□□ -0.31
LINC01164-201ENST00000341866 ASCC2Q9H1I8 757 aaPredicted RBP13.1□□□□□ -0.31
LINC01164-201ENST00000341866 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
LINC01164-201ENST00000341866 GPATCH2LQ9NWQ4 482 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 NEU2Q9Y3R4 380 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 FSCN2O14926 492 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 CST8O60676 142 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 NUDT17P0C025 328 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 SPATA31D3P0C874 917 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 Q3C1V9 767 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 SLFN12LQ6IEE8 588 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 EFCAB12Q6NXP0 572 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 CEP128Q6ZU80 1094 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 SPATA31D4Q6ZUB0 917 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 RFX6Q8HWS3 928 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 JOSD2Q8TAC2 188 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 DTX3LQ8TDB6 740 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 SCG3Q8WXD2 468 aaKnown RBP13.1□□□□□ -0.31
LINC01164-201ENST00000341866 YIPF2Q9BWQ6 316 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 TXLNGYQ9BZA5 131 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
LINC01164-201ENST00000341866 E7ENQ6 273 aa13.09□□□□□ -0.31
LINC01164-201ENST00000341866 HNRNPRO43390 633 aaKnown RBP13.09□□□□□ -0.31
LINC01164-201ENST00000341866 TTC4O95801 387 aa13.09□□□□□ -0.31
LINC01164-201ENST00000341866 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
LINC01164-201ENST00000341866 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
LINC01164-201ENST00000341866 SKIP12755 728 aa13.09□□□□□ -0.31
LINC01164-201ENST00000341866 MAGEA4P43358 317 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms