RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 SMYD3Q9H7B4 428 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 VRTNQ9H8Y1 702 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 USP18Q9UMW8 372 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 A0A0G2JLL6 359 aaPredicted RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 GPR25O00155 361 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 HBP1O60381 514 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 EDF1O60869 148 aaKnown RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 TMEM63AO94886 807 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 UNC5CO95185 931 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 ZWINTO95229 277 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 EZRP15311 586 aaKnown RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 KRT4P19013 534 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 MIPP30301 263 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 ORC1Q13415 861 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 SLC1A5Q15758 541 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 KLHL38Q2WGJ6 581 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 PRRT2Q7Z6L0 340 aaPredicted RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 UNC45BQ8IWX7 931 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 FBF1Q8TES7 1133 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 PAFAH2Q99487 392 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 ELOVL4Q9GZR5 314 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 PRMT7Q9NVM4 692 aaPredicted RBP15.25■□□□□ 0.03
TDP2-201ENST00000341060 PCSK1NQ9UHG2 260 aa15.25■□□□□ 0.03
TDP2-201ENST00000341060 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 LACTBL1A8MY62 500 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 IRF6O14896 467 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 MICAL2O94851 1124 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 TRUB2O95900 331 aaKnown RBP15.24■□□□□ 0.03
TDP2-201ENST00000341060 ATICP31939 592 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 PCK1P35558 622 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 GPD2P43304 727 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 EFTUD2Q15029 972 aaKnown RBP eCLIP15.24■□□□□ 0.03
TDP2-201ENST00000341060 JADE1Q6IE81 842 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 CCDC62Q6P9F0 684 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 C3orf62Q6ZUJ4 267 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 RFX6Q8HWS3 928 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 PDIK1LQ8N165 341 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 FBXO36Q8NEA4 188 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 LRRC8CQ8TDW0 803 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 MRRFQ96E11 262 aaKnown RBP15.24■□□□□ 0.03
TDP2-201ENST00000341060 ASCC2Q9H1I8 757 aaPredicted RBP15.24■□□□□ 0.03
TDP2-201ENST00000341060 RSAD1Q9HA92 442 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 IFT122Q9HBG6 1241 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 SLCO1B3Q9NPD5 702 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 USH1CQ9Y6N9 552 aa15.24■□□□□ 0.03
TDP2-201ENST00000341060 RALGAPA2Q2PPJ7 1873 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 DNAJC25-GNG10A0A024R161 153 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 TCRBV7S3A2A0A539 114 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 ADM5C9JUS6 153 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 M0QYV0 167 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 MCF2LO15068 1137 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 HMGCRP04035 888 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 KRT16P08779 473 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 STAG3L1P0CL83 205 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 TSHRP16473 764 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 EIF3EP60228 445 aaKnown RBP15.23■□□□□ 0.03
TDP2-201ENST00000341060 TAF5Q15542 800 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 FAM187BQ17R55 369 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 FBXO16Q8IX29 292 aaPredicted RBP15.23■□□□□ 0.03
TDP2-201ENST00000341060 MZB1Q8WU39 189 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 HSPH1Q92598 858 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 DCPSQ96C86 337 aaKnown RBP15.23■□□□□ 0.03
TDP2-201ENST00000341060 ZBTB10Q96DT7 871 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 CYP3A43Q9HB55 503 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 ASNSD1Q9NWL6 643 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 KAT6AQ92794 2004 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 ENDOD1O94919 500 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 C22orf31O95567 290 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 RBP3P10745 1247 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 MCF2P10911 925 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 EPHX2P34913 555 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 MAP2K2P36507 400 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 ZNF143P52747 638 aaPredicted RBP15.23■□□□□ 0.03
TDP2-201ENST00000341060 POU5F1BQ06416 359 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 SETDB1Q15047 1291 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 E2F5Q15329 346 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 FAM102AQ5T9C2 384 aaPredicted RBP15.23■□□□□ 0.03
TDP2-201ENST00000341060 HHATQ5VTY9 493 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 LVRNQ6Q4G3 990 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 RPAINQ86UA6 219 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 TMEM130Q8N3G9 435 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 KIF2BQ8N4N8 673 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 FAM71DQ8N9W8 422 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 SPATA18Q8TC71 538 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 L3MBTL3Q96JM7 780 aaPredicted RBP15.23■□□□□ 0.03
TDP2-201ENST00000341060 CALN1Q9BXU9 219 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 ADAM33Q9BZ11 813 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 ASB7Q9H672 318 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 XPO7Q9UIA9 1087 aaKnown RBP15.23■□□□□ 0.03
TDP2-201ENST00000341060 MCM8Q9UJA3 840 aa15.23■□□□□ 0.03
TDP2-201ENST00000341060 SCN1AP35498 2009 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 HGSO14964 777 aaPredicted RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 VDRP11473 427 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 P4HA1P13674 534 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 PHKA2P46019 1235 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 BASP1P80723 227 aaKnown RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 TNFAIP2Q03169 654 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 RNASELQ05823 741 aaKnown RBP15.22■□□□□ 0.03
TDP2-201ENST00000341060 DPYSL3Q14195 570 aa15.22■□□□□ 0.03
TDP2-201ENST00000341060 SULF1Q8IWU6 871 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms