RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CCNE2O96020 404 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 SERPIND1P05546 499 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 RBBP5Q15291 538 aaKnown RBP13.37□□□□□ -0.27
LIN54-201ENST00000340417 ZNF792Q3KQV3 632 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 ERAP2Q6P179 960 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 FAM172AQ8WUF8 416 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 MARCH2Q9P0N8 246 aa13.37□□□□□ -0.27
LIN54-201ENST00000340417 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 PPP1R3GB7ZBB8 358 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 HGSO14964 777 aaPredicted RBP13.36□□□□□ -0.27
LIN54-201ENST00000340417 ZW10O43264 779 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 CAND2O75155 1236 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 EOMESO95936 686 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 USP17L7P0C7H9 530 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 GPR158Q5T848 1215 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 ANKRD20A3Q5VUR7 823 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
LIN54-201ENST00000340417 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 CFAP69A5D8W1 941 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 KRT14P02533 472 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 HIST1H2AGP0C0S8 130 aaPredicted RBP13.36□□□□□ -0.27
LIN54-201ENST00000340417 HIST1H2ADP20671 130 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 PON1P27169 355 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 FAM131BQ86XD5 332 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 HIST1H2AHQ96KK5 128 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 HIST1H2AJQ99878 128 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 H2AFJQ9BTM1 129 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 RRN3Q9NYV6 651 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 BAZ2BQ9UIF8 2168 aaKnown RBP13.36□□□□□ -0.27
LIN54-201ENST00000340417 SESN2P58004 480 aaPredicted RBP13.36□□□□□ -0.27
LIN54-201ENST00000340417 STX1BP61266 288 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 SLC18A3Q16572 532 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 ZRANB3Q5FWF4 1079 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 SZRD1Q7Z422 152 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 CPA6Q8N4T0 437 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 CFAP61Q8NHU2 1237 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 ETNPPLQ8TBG4 499 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 FOXN3O00409 490 aaPredicted RBP13.36□□□□□ -0.27
LIN54-201ENST00000340417 CIB2O75838 187 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 MCOLN1Q9GZU1 580 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 CCDC188H7C350 402 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 ZNF263O14978 683 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 ZNF131P52739 623 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 TIGD7Q6NT04 549 aaPredicted RBP13.36□□□□□ -0.27
LIN54-201ENST00000340417 RD3Q7Z3Z2 195 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 C1orf54Q8WWF1 131 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 TATDN2Q93075 761 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 SAGE1Q9NXZ1 904 aa13.36□□□□□ -0.27
LIN54-201ENST00000340417 IQANK1A0A1B0GTG1 560 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 DYNC1I1O14576 645 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 PRPF4O43172 522 aaKnown RBP eCLIP13.35□□□□□ -0.271e-16■■■■■ 34.3
LIN54-201ENST00000340417 MICAL2O94851 1124 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 MMEP08473 750 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 CDR2Q01850 454 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 GKAP1Q5VSY0 366 aaPredicted RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 RNF10Q8N5U6 811 aaKnown RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 BADQ92934 168 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 ADAM28Q9UKQ2 775 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 LRRIQ3A6PVS8 624 aaPredicted RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 MLLT1Q03111 559 aaPredicted RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 POU5F1BQ06416 359 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 EEF1DP3Q658K8 133 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 PTRHD1Q6GMV3 140 aaKnown RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 FUT10Q6P4F1 479 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 SARM1Q6SZW1 724 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 SEMA6BQ9H3T3 888 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 ABCC13Q9NSE7 274 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 NUDT5Q9UKK9 219 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 C2CD2Q9Y426 696 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 STX7O15400 261 aaKnown RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 CCDC121Q6ZUS5 278 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 TRIM59Q8IWR1 403 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 ELOA2Q8IYF1 753 aaPredicted RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 ATP13A1Q9HD20 1204 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 SCAMP3O14828 347 aaKnown RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 PNMA6AP0CW24 399 aaPredicted RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 CASP2P42575 452 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 GJA9P57773 515 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 ELF2Q15723 593 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 NUP93Q8N1F7 819 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 TMEM161BQ8NDZ6 487 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 CCDC78A2IDD5 438 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 ADH1CP00326 375 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 CYP11B1P15538 503 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 OR1E1P30953 314 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 SRRM1Q8IYB3 904 aaKnown RBP13.35□□□□□ -0.27
LIN54-201ENST00000340417 MAB21L3Q8N8X9 362 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 GPATCH11Q8N954 259 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 KRT35Q92764 455 aa13.35□□□□□ -0.27
LIN54-201ENST00000340417 KPNA3O00505 521 aaPredicted RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 TMCC1O94876 653 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 LUC7L3O95232 432 aaKnown RBP13.34□□□□□ -0.27
LIN54-201ENST00000340417 CHKAP35790 457 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 TNFSF9P41273 254 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 ARHGAP1Q07960 439 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
LIN54-201ENST00000340417 DUSP4Q13115 394 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms