RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 NAP1L3Q99457 506 aaPredicted RBP22.3■■□□□ 1.16
VRK2-201ENST00000340157 PKMYT1Q99640 499 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 KLHL11Q9NVR0 708 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 HCSTQ9UBK5 93 aa22.3■■□□□ 1.16
VRK2-201ENST00000340157 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.3■■□□□ 1.16
VRK2-201ENST00000340157 TMEM189-UBE2V1I3L0A0 370 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 NPR3P17342 541 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 PAX3P23760 479 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 GJC1P36383 396 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 SSR1P43307 286 aaKnown RBP22.29■■□□□ 1.16
VRK2-201ENST00000340157 SLC25A11Q02978 314 aaKnown RBP22.29■■□□□ 1.16
VRK2-201ENST00000340157 RNASELQ05823 741 aaKnown RBP22.29■■□□□ 1.16
VRK2-201ENST00000340157 MYCBPAPQ8TBZ2 947 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 HSFY1Q96LI6 401 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 TMEM209Q96SK2 561 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 PLEKHA4Q9H4M7 779 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 CYLDQ9NQC7 956 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 LTBP2Q14767 1821 aa22.29■■□□□ 1.16
VRK2-201ENST00000340157 CCDC151A5D8V7 595 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 SART1O43290 800 aaKnown RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 GLI1P08151 1106 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 IL1R2P27930 398 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 ZNF143P52747 638 aaPredicted RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 CACNA2D1P54289 1103 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 KCTD19Q17RG1 926 aaPredicted RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 LRRC26Q2I0M4 334 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 GLE1Q53GS7 698 aaKnown RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 RAB6CQ53S08 254 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 LRRC38Q5VT99 294 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 FAM35AQ86V20 835 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 PRELID2Q8N945 189 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 PAWRQ96IZ0 340 aaKnown RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 ACBD6Q9BR61 282 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 RAB6CQ9H0N0 254 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 NRDE2Q9H7Z3 1164 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 KRT82Q9NSB4 513 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 DSEQ9UL01 958 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 PRG3Q9Y2Y8 225 aaPredicted RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 ZSCAN5CA6NGD5 496 aaPredicted RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 PARNO95453 639 aaKnown RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 LCP1P13796 627 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 PCSK1P29120 753 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 OR1G1P47890 313 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 RABGGTBP53611 331 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 BRD3Q15059 726 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 INTS6LQ5JSJ4 861 aaKnown RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 SH3PXD2AQ5TCZ1 1133 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 FAM171BQ6P995 826 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 FAM43BQ6ZT52 329 aaPredicted RBP22.28■■□□□ 1.16
VRK2-201ENST00000340157 RXFP2Q8WXD0 754 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 SMOQ99835 787 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 TMLHEQ9NVH6 421 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 STIM2Q9P246 746 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 PCDHB8Q9UN66 801 aa22.28■■□□□ 1.16
VRK2-201ENST00000340157 COL4A6Q14031 1691 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 FSCN2O14926 492 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 SEC31AO94979 1220 aaKnown RBP22.27■■□□□ 1.16
VRK2-201ENST00000340157 MYBL2P10244 700 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 TYMPP19971 482 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 GPD1P21695 349 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 CLUL1Q15846 466 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 OVOS1Q6IE37 1185 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 LRRTM3Q86VH5 581 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 METTL23Q86XA0 190 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 ZDHHC17Q8IUH5 632 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 ABI1Q8IZP0 508 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 ANKLE1Q8NAG6 615 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 ZMIZ2Q8NF64 920 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 EXD1Q8NHP7 514 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 ACSF2Q96CM8 615 aaPredicted RBP22.27■■□□□ 1.16
VRK2-201ENST00000340157 MED10Q9BTT4 135 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 RHOBTB2Q9BYZ6 727 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 ARGLU1Q9NWB6 273 aaPredicted RBP22.27■■□□□ 1.16
VRK2-201ENST00000340157 PATJQ8NI35 1801 aa22.27■■□□□ 1.16
VRK2-201ENST00000340157 RARAP10276 462 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 ADCY1Q08828 1119 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 PKN2Q16513 984 aaKnown RBP22.26■■□□□ 1.15
VRK2-201ENST00000340157 C15orf59Q2T9L4 293 aaPredicted RBP22.26■■□□□ 1.15
VRK2-201ENST00000340157 MYLPFQ96A32 169 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 C11orf49Q9H6J7 331 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 AMACRQ9UHK6 382 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 LRFN2Q9ULH4 789 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 DPYSL4O14531 572 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 CLTBP09497 229 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 FAM200BP0CF97 657 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 PDGFRAP16234 1089 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 ACADSBP45954 432 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 MAP3K7CLP57077 242 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 CCDC14Q49A88 953 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 CCDC70Q6NSX1 233 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.26■■□□□ 1.15
VRK2-201ENST00000340157 SLC26A9Q7LBE3 791 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 NPAS4Q8IUM7 802 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 KCTD13Q8WZ19 329 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 NDRG1Q92597 394 aaKnown RBP22.26■■□□□ 1.15
VRK2-201ENST00000340157 CFAP57Q96MR6 1250 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 FAM193BQ96PV7 902 aaPredicted RBP22.26■■□□□ 1.15
VRK2-201ENST00000340157 KCNK16Q96T55 309 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 CNPY3Q9BT09 278 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 TMEM39AQ9NV64 488 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms