RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 RAET1EQ8TD07 263 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 CKAP2Q8WWK9 683 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 PAIP2Q9BPZ3 127 aaKnown RBP17.13■□□□□ 0.33
LITAF-201ENST00000339430 SDCBP2Q9H190 292 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 SYNCQ9H7C4 482 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 METTL5Q9NRN9 209 aaKnown RBP17.13■□□□□ 0.33
LITAF-201ENST00000339430 SETD4Q9NVD3 440 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 DDX56Q9NY93 547 aaKnown RBP17.13■□□□□ 0.33
LITAF-201ENST00000339430 COL1A2P08123 1366 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 PGK1P00558 417 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 GHRP10912 638 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 GCAP28676 217 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 TAP1Q03518 808 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 MARCH8Q5T0T0 291 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 MTHFD1LQ6UB35 978 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 RELL1Q8IUW5 271 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 ZBED8Q8IZ13 594 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 P3H4Q92791 437 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 TWNKQ96RR1 684 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 CPXM1Q96SM3 734 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 SMYD3Q9H7B4 428 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 VPS37BQ9H9H4 285 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 RPF1Q9H9Y2 349 aaKnown RBP17.13■□□□□ 0.33
LITAF-201ENST00000339430 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.13■□□□□ 0.33
LITAF-201ENST00000339430 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 SIX4Q9UIU6 781 aa17.13■□□□□ 0.33
LITAF-201ENST00000339430 MAGEB2O15479 319 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 LRCH4O75427 683 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 ITGB3P05106 788 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 CD48P09326 243 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 COPS2P61201 443 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 GAD2Q05329 585 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 MTM1Q13496 603 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 MFSD10Q14728 455 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 ZNF667Q5HYK9 610 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 DRICH1Q6PGQ1 229 aaPredicted RBP17.12■□□□□ 0.33
LITAF-201ENST00000339430 ANKMY2Q8IV38 441 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 FUKQ8N0W3 1084 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 CCHCR1Q8TD31 782 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 CFAP57Q96MR6 1250 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 TGS1Q96RS0 853 aaKnown RBP17.12■□□□□ 0.33
LITAF-201ENST00000339430 FZD8Q9H461 694 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 SAGE1Q9NXZ1 904 aa17.12■□□□□ 0.33
LITAF-201ENST00000339430 C3orf70A6NLC5 250 aaPredicted RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 B4GALT4O60513 344 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 SMIM10L2AP0DMW4 78 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 SMIM10L2BP0DMW5 78 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 RARBP10826 455 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 RAD23BP54727 409 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 GDF10P55107 478 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 YWHAEP62258 255 aaKnown RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 OTUD4Q01804 1114 aaKnown RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 SLC25A11Q02978 314 aaKnown RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 MBTD1Q05BQ5 628 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 TFDP1Q14186 410 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 NIPA2Q8N8Q9 360 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 C1orf127Q8N9H9 656 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 ACTL9Q8TC94 416 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 KIF9Q9HAQ2 790 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 EURLQ9NYK6 297 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 NKIRAS1Q9NYS0 192 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 STRIP2Q9ULQ0 834 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 DRG1Q9Y295 367 aaKnown RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 PIK3R2O00459 728 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 HGSO14964 777 aaPredicted RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 CST8O60676 142 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 GNRH1P01148 92 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 HMGCRP04035 888 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 ERBB2P04626 1255 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 GJA9P57773 515 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 PDIA2Q13087 525 aaKnown RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 TAF5Q15542 800 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 FAM182AQ5T1J6 154 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 RNASEH2BQ5TBB1 312 aaKnown RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 JADE1Q6IE81 842 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 CYB5D1Q6P9G0 228 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 CD248Q9HCU0 757 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 USP15Q9Y4E8 981 aaPredicted RBP17.11■□□□□ 0.33
LITAF-201ENST00000339430 KAT6AQ92794 2004 aa17.11■□□□□ 0.33
LITAF-201ENST00000339430 CEP350Q5VT06 3117 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 SIGLEC16A6NMB1 481 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 LACTBL1A8MY62 500 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
LITAF-201ENST00000339430 ITGAVP06756 1048 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 POLR2BP30876 1174 aaKnown RBP17.1■□□□□ 0.33
LITAF-201ENST00000339430 PSEN2P49810 448 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 PURAQ00577 322 aaKnown RBP17.1■□□□□ 0.33
LITAF-201ENST00000339430 MORF4L2Q15014 288 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 ARHGEF18Q6ZSZ5 1173 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 LINC01465Q8N7H1 131 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 MAML1Q92585 1016 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 AKT3Q9Y243 479 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 MED7O43513 233 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 PIAS1O75925 651 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
LITAF-201ENST00000339430 ABHD2P08910 425 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 PTPN7P35236 360 aa17.1■□□□□ 0.33
LITAF-201ENST00000339430 XYLT1Q86Y38 959 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms