RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 USP33Q8TEY7 942 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ALG3Q92685 438 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 SPON2Q9BUD6 331 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 RNPEPQ9H4A4 650 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 TYW5A2RUC4 315 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 CHUKO15111 745 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 CLNS1AP54105 237 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 DRG2P55039 364 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PAN2Q504Q3 1202 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PGM2Q96G03 612 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 MAF1Q9H063 256 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 DDX43Q9NXZ2 648 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 SAE1Q9UBE0 346 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ZNF844Q08AG5 666 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PTK7Q13308 1070 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 MUM1Q2TAK8 710 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 GPR142Q7Z601 462 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 AHDC1Q5TGY3 1603 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 MAP3K7CLP57077 242 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 RYBPQ8N488 228 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 WNK4Q96J92 1243 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 AJAP1Q9UKB5 411 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 APOBEC2Q9Y235 224 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 HES2Q9Y543 173 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 BAG2O95816 211 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ADSSP30520 456 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 MAMLD1Q13495 774 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 MORF4L2Q15014 288 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 KATNAL2Q8IYT4 538 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 RASGEF1CQ8N431 466 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 NIFKQ9BYG3 293 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 WDR70Q9NW82 654 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 NINJ2Q9NZG7 142 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 TRIM66O15016 1216 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 MIPP30301 263 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ACAP1Q15027 740 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 LRRC6Q86X45 466 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 DNAJC3Q13217 504 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ADGRF2Q8IZF7 708 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PCDH9Q9HC56 1237 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 TMEM191CA6NGB0 347 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 AP3B1O00203 1094 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ZNF189O75820 626 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ATP5HO75947 161 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 HMGCRP04035 888 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PECAM1P16284 738 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 YWHAZP63104 245 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 SLFN11Q7Z7L1 901 aa6.56□□□□□ -1.36
PRKDC-202ENST00000338368 DCP1BQ8IZD4 617 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PDCD7Q8N8D1 485 aaKnown RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 PRG3Q9Y2Y8 225 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-202ENST00000338368 ZNF142P52746 1687 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 GYG2O15488 501 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 KITP10721 976 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 AKR1A1P14550 325 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 AXLP30530 894 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 THPOP40225 353 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PSEN2P49810 448 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SERPINB9P50453 376 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 RPL7AP62424 266 aaKnown RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SREBF2Q12772 1141 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 DAB2IPQ5VWQ8 1189 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PHF13Q86YI8 300 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 IQCKQ8N0W5 287 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PPP2R3CQ969Q6 453 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PCYOX1Q9UHG3 505 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SLC6A3Q01959 620 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ZDHHC17Q8IUH5 632 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 LRRC57Q8N9N7 239 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 MANSC4A6NHS7 340 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 MICAL2O94851 1124 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ZSCAN5DPP0CG00 497 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 KDELR1P24390 212 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ACAT1P24752 427 aaKnown RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 TNFRSF8P28908 595 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 LHX1P48742 406 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 DRP2Q13474 957 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 CCDC33Q8N5R6 958 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 HDAC11Q96DB2 347 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 STAMBPL1Q96FJ0 436 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 TBCBQ99426 244 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 KDM3BQ7LBC6 1761 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 GLTPD2A6NH11 291 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SPECC1L-ADORA2AF8WAN1 911 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ZWINTO95229 277 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 PAPOLAP51003 745 aaKnown RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 MFSD10Q14728 455 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 DENND1BQ6P3S1 775 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 DEFB106AQ8N104 65 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ATXN7L3BQ96GX2 97 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 WDCPQ9H6R7 721 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 BTBD19C9JJ37 291 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 RPSAP08865 295 aaKnown RBP6.55□□□□□ -1.36
PRKDC-202ENST00000338368 LRRC38Q5VT99 294 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 MTHFD1LQ6UB35 978 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 IFT43Q96FT9 208 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 ZNF112Q9UJU3 913 aa6.55□□□□□ -1.36
PRKDC-202ENST00000338368 SLC15A5A6NIM6 579 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms