RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 KIFC3Q9BVG8 833 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 TM9SF1O15321 606 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 E2F6O75461 281 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CSPG5O95196 566 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CALB1P05937 261 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 ALDH1A3P47895 512 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CBWD2Q8IUF1 395 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 SIX6OS1Q8N1H7 587 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CNDP1Q96KN2 507 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 AGAP3Q96P47 875 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 PPCSQ9HAB8 311 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 UTP6Q9NYH9 597 aaKnown RBP13.78□□□□□ -0.2
COL2A1-201ENST00000337299 PI4KBQ9UBF8 816 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 ELK3P41970 407 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 YWHAEP62258 255 aaKnown RBP13.78□□□□□ -0.2
COL2A1-201ENST00000337299 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 RASGEF1CQ8N431 466 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 ACTL9Q8TC94 416 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 BRD8Q9H0E9 1235 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 TAS2R1Q9NYW7 299 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
COL2A1-201ENST00000337299 PRR5-ARHGAP8B1AHC4 643 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 DNALI1O14645 258 aaPredicted RBP13.77□□□□□ -0.2
COL2A1-201ENST00000337299 ARHGAP8P85298 464 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 PERM1Q5SV97 790 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 ARHGEF16Q5VV41 709 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 PDPK2PQ6A1A2 396 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 C16orf46Q6P387 395 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 ZDHHC24Q6UX98 284 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 BNC2Q6ZN30 1099 aaPredicted RBP13.77□□□□□ -0.2
COL2A1-201ENST00000337299 JADE3Q92613 823 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 PBXIP1Q96AQ6 731 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 ZFRQ96KR1 1074 aaKnown RBP13.77□□□□□ -0.2
COL2A1-201ENST00000337299 CCDC17Q96LX7 622 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 IL17RBQ9NRM6 502 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 TOPORSQ9NS56 1045 aaPredicted RBP13.77□□□□□ -0.2
COL2A1-201ENST00000337299 HESX1Q9UBX0 185 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 GRID1Q9ULK0 1009 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 UMODL1Q5DID0 1318 aa13.77□□□□□ -0.2
COL2A1-201ENST00000337299 AP3B1O00203 1094 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 DEAF1O75398 565 aaPredicted RBP13.77□□□□□ -0.21
COL2A1-201ENST00000337299 VCAM1P19320 739 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 MFSD5Q6N075 450 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 ZBTB49Q6ZSB9 765 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 ADCK1Q86TW2 530 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 TTLL6Q8N841 843 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 TNFRSF25Q93038 417 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 ZNF668Q96K58 619 aaPredicted RBP13.77□□□□□ -0.21
COL2A1-201ENST00000337299 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.21
COL2A1-201ENST00000337299 GRHL1Q9NZI5 618 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 LRRC42Q9Y546 428 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 GRAP2O75791 330 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 VCLP18206 1134 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 IL10P22301 178 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 HMOX2P30519 316 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 CRKP46108 304 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 WDR4P57081 412 aaKnown RBP13.77□□□□□ -0.21
COL2A1-201ENST00000337299 ZNF543Q08ER8 600 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 BST1Q10588 318 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 FUT2Q10981 343 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 TRAF2Q12933 501 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 NCOA4Q13772 614 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 ATP13A4Q4VNC1 1196 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 FASTKD1Q53R41 847 aaKnown RBP13.77□□□□□ -0.21
COL2A1-201ENST00000337299 TEDDM1Q5T9Z0 273 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 NOP9Q86U38 636 aaKnown RBP13.77□□□□□ -0.21
COL2A1-201ENST00000337299 THNSL1Q8IYQ7 743 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 SIX5Q8N196 739 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 C4orf32Q8N8J7 132 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 PGBD4Q96DM1 585 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 RMND5BQ96G75 393 aaPredicted RBP13.77□□□□□ -0.21
COL2A1-201ENST00000337299 CDRT15Q96T59 188 aa13.77□□□□□ -0.21
COL2A1-201ENST00000337299 MYO5BQ9ULV0 1848 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 NEURL4Q96JN8 1562 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 K7ERI5 159 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 M0R3G1 203 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 DDX3YO15523 660 aaKnown RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 ATP9BO43861 1147 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 CYP2R1Q6VVX0 501 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 HEXIM2Q96MH2 286 aaKnown RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 MTMR4Q9NYA4 1195 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 BAG5Q9UL15 447 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 TISP43B9A030 160 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 PEX2P28328 305 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 PTK6Q13882 451 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 EML3Q32P44 896 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 SBK1Q52WX2 424 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 FAM102AQ5T9C2 384 aaPredicted RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 PPP1R18Q6NYC8 613 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 TMC5Q6UXY8 1006 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 NET1Q7Z628 596 aaPredicted RBP13.76□□□□□ -0.21
COL2A1-201ENST00000337299 DNAJC19Q96DA6 116 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 CEP19Q96LK0 163 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 ZC4H2Q9NQZ6 224 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 PCDHB2Q9Y5E7 798 aa13.76□□□□□ -0.21
COL2A1-201ENST00000337299 MT-CO1P00395 513 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms