RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 PGM5Q15124 567 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 OASLQ15646 514 aaKnown RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 SNRNP48Q6IEG0 339 aaKnown RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 PLEKHA7Q6IQ23 1121 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 RNF168Q8IYW5 571 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.57□□□□□ -0.727e-9■■■■□ 21.3
HIF1A-202ENST00000337138 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 MECRQ9BV79 373 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TRIM55Q9BYV6 548 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 ZNF395Q9H8N7 513 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 PSMC3IPQ9P2W1 217 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 XPO7Q9UIA9 1087 aaKnown RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 SCN4AP35499 1836 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TRAFD1O14545 582 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 DNALI1O14645 258 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CAPN9O14815 690 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 LIASO43766 372 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CD48P09326 243 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TNFSF9P41273 254 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CDH8P55286 799 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 RTP1P59025 263 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 MKRN3Q13064 507 aaKnown RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 DSTYKQ6XUX3 929 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 SPOCD1Q6ZMY3 1216 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 SPATA24Q86W54 205 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 PDIK1LQ8N165 341 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 WDTC1Q8N5D0 677 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 NETO2Q8NC67 525 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CCDC124Q96CT7 223 aaKnown RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 SLC7A6OSQ96CW6 309 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TSSK1BQ9BXA7 367 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 RPAP3Q9H6T3 665 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 SLC38A10Q9HBR0 1119 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 H3BRJ5 948 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CST3P01034 146 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 PHBP35232 272 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 ALDH18A1P54886 795 aaKnown RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 ARL4CP56559 192 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 MYL6P60660 151 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TMPRSS15P98073 1019 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 KHDC1Q4VXA5 237 aaKnown RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 PLEKHG4Q58EX7 1191 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 NPNTQ6UXI9 565 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CYP4V2Q6ZWL3 525 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CCDC60Q8IWA6 550 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 ABRAQ8N0Z2 381 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 FAM151AQ8WW52 585 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 FAM81BQ96LP2 452 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TIPINQ9BVW5 301 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 RNPEPL1Q9HAU8 725 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 IP6K2Q9UHH9 426 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 CORO1CQ9ULV4 474 aaPredicted RBP10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TRIP11Q15643 1979 aa10.57□□□□□ -0.72
HIF1A-202ENST00000337138 TCRBV7S3A2A0A539 114 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.724e-7■■■■□ 21.1
HIF1A-202ENST00000337138 ASNSP08243 561 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 ABHD2P08910 425 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 PYGBP11216 843 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 KCNA2P16389 499 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 PSMC1P62191 440 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 LMNB2Q03252 620 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 THOC5Q13769 683 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 TAF5Q15542 800 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 FNBP1LQ5T0N5 605 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 RNF43Q68DV7 783 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 ZCCHC9Q8N567 271 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 GSDMBQ8TAX9 411 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 PIP4K2CQ8TBX8 421 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 AGR3Q8TD06 166 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 RBM41Q96IZ5 413 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 MOV10L1Q9BXT6 1211 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 MANSC1Q9H8J5 431 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 ARL8BQ9NVJ2 186 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 RNF181Q9P0P0 153 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SCINQ9Y6U3 715 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 FAM237BA0A1B0GVD1 139 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 TRPA1O75762 1119 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 CALB2P22676 271 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 GLRA2P23416 452 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 IGBP1P78318 339 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 NR1H3Q13133 447 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 MSS51Q4VC12 460 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 PPP6R3Q5H9R7 873 aaPredicted RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SPDYAQ5MJ70 313 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 CES4AQ5XG92 561 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 ZCCHC23Q6ZST2 131 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 LRRC71Q8N4P6 559 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 FLAD1Q8NFF5 587 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 GRAMD1AQ96CP6 724 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 TRIM56Q9BRZ2 755 aaKnown RBP10.56□□□□□ -0.72
HIF1A-202ENST00000337138 GPATCH2LQ9NWQ4 482 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SLC5A4Q9NY91 659 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 ZNF711Q9Y462 761 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 SPDYE5A6NIY4 337 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 TOM1L1O75674 476 aa10.56□□□□□ -0.72
HIF1A-202ENST00000337138 PYGLP06737 847 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms