RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RAD51CO43502 376 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 SPAG7O75391 227 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 PDCLQ13371 301 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 NLRP9Q7RTR0 991 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 SERPINB11Q96P15 392 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 OSMRQ99650 979 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 DCLK3Q9C098 648 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 UBE2OQ9C0C9 1292 aaKnown RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 HACD1B0YJ81 288 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 ZNF286BP0CG31 522 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 PRKCIP41743 596 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 TUFMP49411 452 aaKnown RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 ZNF280AP59817 542 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 PSMC6P62333 389 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 CDH18Q13634 790 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 NOL9Q5SY16 702 aaKnown RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 MFN1Q8IWA4 741 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 TBC1D13Q9NVG8 400 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 SLC25A13Q9UJS0 675 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 ESRRBO95718 433 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 NR2C2P49116 596 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 ITGA8P53708 1063 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 FAM110CQ1W6H9 321 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 MEI1Q5TIA1 1274 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 OVOS1Q6IE37 1185 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 MRNIPQ6NTE8 343 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 SH3KBP1Q96B97 665 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 FAR2Q96K12 515 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 BTBD6Q96KE9 485 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 WDR70Q9NW82 654 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 HACD3Q9P035 362 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 TLR2O60603 784 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 CXCL8P10145 99 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 ACO1P21399 889 aaKnown RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 PRMT2P55345 433 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 ESRRGP62508 458 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 SPOCD1Q6ZMY3 1216 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 MCOLN2Q8IZK6 566 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 N4BP2L2Q92802 583 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 FGD4Q96M96 766 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 TRIM51Q9BSJ1 452 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 ARL2BPQ9Y2Y0 163 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 GLTPD2A6NH11 291 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 C2orf81A6NN90 581 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 FAM133BQ5BKY9 247 aaKnown RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 PDZD8Q8NEN9 1154 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 ADCY6O43306 1168 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 GJB7Q6PEY0 223 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 FAM172AQ8WUF8 416 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 SRPK1Q96SB4 655 aaKnown RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 DMAP1Q9NPF5 467 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 KLK14Q9P0G3 267 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 MOSPD1Q9UJG1 213 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 C2CD2Q9Y426 696 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 GOLGA8TH3BQL2 631 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 TIMM44O43615 452 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 EFCAB14O75071 495 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 SPDYCQ5MJ68 293 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 TMTC4Q5T4D3 741 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 SUGP1Q8IWZ8 645 aaKnown RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 FAM9CQ8IZT9 166 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 VAT1Q99536 393 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 AP4E1Q9UPM8 1137 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 FGFR4P22455 802 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 MDH1P40925 334 aaKnown RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 NCKAP1LP55160 1127 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 PTK7Q13308 1070 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 SLC12A1Q13621 1099 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 PTGISQ16647 500 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 CPB2Q96IY4 423 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 YME1L1Q96TA2 773 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 ASPSCR1Q9BZE9 553 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 SUDS3Q9H7L9 328 aaPredicted RBP11.86□□□□□ -0.51
COL4A5-201ENST00000328300 KCND1Q9NSA2 647 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
COL4A5-201ENST00000328300 BTNL10A8MVZ5 291 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 H0Y626 953 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 ANP32DO95626 131 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 HOXB8P17481 243 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 ZBTB17Q13105 803 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 USP10Q14694 798 aaKnown RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 RBBP7Q16576 425 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 MEA1Q16626 185 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 CATSPER1Q8NEC5 780 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 OXCT2Q9BYC2 517 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 PPP1R37O75864 691 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 RPL9P32969 192 aaKnown RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 MAGEA9P43362 315 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 CACNB2Q08289 660 aaPredicted RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 NAB1Q13506 487 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 GPR142Q7Z601 462 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 DNAJB3Q8WWF6 145 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 DUSP9Q99956 384 aaKnown RBP11.85□□□□□ -0.51
COL4A5-201ENST00000328300 KLHL11Q9NVR0 708 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 TRHDEQ9UKU6 1024 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 CACNA1FO60840 1977 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 MYL2P10916 166 aa11.85□□□□□ -0.51
COL4A5-201ENST00000328300 MRPS6P82932 125 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms