RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 HACD3Q9P035 362 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 KIF17Q9P2E2 1029 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 HMGXB4Q9UGU5 601 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 SRP68Q9UHB9 627 aaKnown RBP9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 DTNAQ9Y4J8 743 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 SLC12A7Q9Y666 1083 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 TAF6LQ9Y6J9 622 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 MYH6P13533 1939 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 ITGB4P16144 1822 aa9.66□□□□□ -0.86
NPIPA1-201ENST00000328085 SF3B1O75533 1304 aaKnown RBP eCLIP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 KDM3AQ9Y4C1 1321 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 OR5K4A6NMS3 321 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 FAM25AB3EWG3 89 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 FAM25CB3EWG5 89 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 FAM25GB3EWG6 89 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 ENPP3O14638 875 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 KCNQ3O43525 872 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 FOXD2O60548 495 aaPredicted RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 DTNBO60941 627 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RHOBTB3O94955 611 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 CBX6O95503 412 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 MMP1P03956 469 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 CAPNS1P04632 268 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RPN1P04843 607 aaKnown RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 HMGN1P05114 100 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 PRKAR1BP31321 381 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RRM2P31350 389 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RFC1P35251 1148 aaPredicted RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 PTGS2P35354 604 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 CHKAP35790 457 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 MLLT6P55198 1093 aaPredicted RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 MAP3K7CLP57077 242 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 ADAM17P78536 824 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 STX3Q13277 289 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 IFIT5Q13325 482 aaKnown RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 ZNF846Q147U1 533 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RARS2Q5T160 578 aaKnown RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 ZDHHC24Q6UX98 284 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RIPOR1Q6ZS17 1223 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 EPM2AIP1Q7L775 607 aaPredicted RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 LIMS2Q7Z4I7 341 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 BRSK2Q8IWQ3 736 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 NATD1Q8N6N6 113 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 PAF1Q8N7H5 531 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 NCOA7Q8NI08 942 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RAB3IL1Q8TBN0 382 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 BRSK1Q8TDC3 778 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 DENND1AQ8TEH3 1009 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 PPP4R1Q8TF05 950 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 GDPD5Q8WTR4 605 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 NLRP7Q8WX94 980 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 S100ZQ8WXG8 99 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 ART4Q93070 314 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 CIDECQ96AQ7 238 aaPredicted RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 TMEM87BQ96K49 555 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 SCYL1Q96KG9 808 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 TRIM47Q96LD4 638 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 MTMR9Q96QG7 549 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 TUBA1CQ9BQE3 449 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 SLC4A5Q9BY07 1137 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RHOBTB2Q9BYZ6 727 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 GRIP2Q9C0E4 1043 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 HOXD1Q9GZZ0 328 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 KLHL25Q9H0H3 589 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 DNAJC18Q9H819 358 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 LIN7BQ9HAP6 207 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 FANCEQ9HB96 536 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 SEPT11Q9NVA2 429 aaKnown RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 PARVAQ9NVD7 372 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 RIC8BQ9NVN3 520 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 GPRC5DQ9NZD1 345 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 NPAP1Q9NZP6 1156 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 WHRNQ9P202 907 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 CEP72Q9P209 647 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 ARMCX3Q9UH62 379 aaPredicted RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 HDAC9Q9UKV0 1011 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 DOLKQ9UPQ8 538 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 SIK3Q9Y2K2 1263 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 TMA7Q9Y2S6 64 aaKnown RBP9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 NEU2Q9Y3R4 380 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 TACC3Q9Y6A5 838 aa9.65□□□□□ -0.86
NPIPA1-201ENST00000328085 MON2Q7Z3U7 1717 aa9.65□□□□□ -0.87
NPIPA1-201ENST00000328085 TIAM2Q8IVF5 1701 aa9.65□□□□□ -0.87
NPIPA1-201ENST00000328085 ZNF609O15014 1411 aa9.65□□□□□ -0.87
NPIPA1-201ENST00000328085 MYH10P35580 1976 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 ZMYM2Q9UBW7 1377 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 A0A087WXM4 84 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 LRRIQ4A6NIV6 560 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 ZSCAN5BA6NJL1 495 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 TRIM75PA6NK02 468 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 H3BRJ5 948 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 H3BSA7 217 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 MTSS1O43312 755 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 PEX14O75381 377 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 RPS6KA4O75676 772 aa9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 IDH1O75874 414 aaKnown RBP9.64□□□□□ -0.87
NPIPA1-201ENST00000328085 PLEKHA8P1O95397 391 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms