RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GDF10P55107 478 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 GTF2BQ00403 316 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 GCNT1Q02742 428 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 GRAPQ13588 217 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 CYLC2Q14093 348 aaPredicted RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 BBS9Q3SYG4 887 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 RALGPS1Q5JS13 557 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 LIN9Q5TKA1 542 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PGM2L1Q6PCE3 622 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 HAUS6Q7Z4H7 955 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 ZNF677Q86XU0 584 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 ZFP28Q8NHY6 868 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 GRAPLQ8TC17 118 aaPredicted RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 POMGNT1Q8WZA1 660 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 SMYD3Q9H7B4 428 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 MRPL47Q9HD33 250 aaKnown RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 TIMMDC1Q9NPL8 285 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 UBAP1Q9NZ09 502 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 MARCOQ9UEW3 520 aaPredicted RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 ZNF232Q9UNY5 417 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PCDHB2Q9Y5E7 798 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 ADAMTSL1Q8N6G6 1762 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 SDR42E2A6NKP2 422 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 TTLL13PA6NNM8 815 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 RGL2O15211 777 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 KITP10721 976 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 TSHRP16473 764 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 PCSK6P29122 969 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 GPSM2P81274 684 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 TMPRSS15P98073 1019 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 PLOD1Q02809 727 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 BTKQ06187 659 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 B3GNT9Q6UX72 402 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 JADE3Q92613 823 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 E2F7Q96AV8 911 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 EBF4Q9BQW3 602 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 C20orf27Q9GZN8 174 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 C10orf88Q9H8K7 445 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 SIRPGQ9P1W8 387 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 ZNRF3Q9ULT6 936 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 HBS1LQ9Y450 684 aaKnown RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 TCRBV9S1A1TA0A576 114 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 H3BNX3 289 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 COPEO14579 308 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 DENRO43583 198 aaKnown RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 STRNO43815 780 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 ATP5BP06576 529 aaKnown RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 PTPN7P35236 360 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 FDFT1P37268 417 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 NOMO3P69849 1222 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 PLCB3Q01970 1234 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 KBTBD12Q3ZCT8 623 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 TXNRD3NBQ6F5E7 133 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 TPTE2Q6XPS3 522 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 SV2AQ7L0J3 742 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF554Q86TJ5 538 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 ALDH16A1Q8IZ83 802 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 ABTB1Q969K4 478 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 ACSF2Q96CM8 615 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 GCNAQ96QF7 691 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 SENP6Q9GZR1 1112 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 PCDHGB4Q9UN71 923 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 LZTS1Q9Y250 596 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 TELO2Q9Y4R8 837 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 PCDHGB5Q9Y5G0 923 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 IVNS1ABPQ9Y6Y0 642 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 RGPD3A6NKT7 1758 aaPredicted RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 COL14A1Q05707 1796 aaKnown RBP13.33□□□□□ -0.28
CCDC60-201ENST00000327554 RGPD4Q7Z3J3 1758 aa13.33□□□□□ -0.28
CCDC60-201ENST00000327554 SF3B1O75533 1304 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 A0A0B4J269 797 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 CCDC195A0A1B0GUA6 201 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 CAPN8A6NHC0 703 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 PDE5AO76074 875 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 RAG1P15918 1043 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 EPHB1P54762 984 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 SNRPFP62306 86 aaKnown RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 RPL7AP62424 266 aaKnown RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ZNF252P-AS1Q0IIN9 211 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 TUBB3Q13509 450 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 DCTN2Q13561 401 aaKnown RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 CHI3L2Q15782 390 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 TBC1D10BQ4KMP7 808 aaPredicted RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ZFYVE27Q5T4F4 411 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ATG16L1Q676U5 607 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ENOSF1Q7L5Y1 443 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 SIAH1Q8IUQ4 282 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 PASD1Q8IV76 773 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 LRRC43Q8N309 656 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 ICA1LQ8NDH6 482 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 FEZF2Q8TBJ5 459 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 CNKSR2Q8WXI2 1034 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 USP6NLQ92738 828 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 FAM84AQ96KN4 292 aa13.32□□□□□ -0.28
CCDC60-201ENST00000327554 SUDS3Q9H7L9 328 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms