RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 KCNJ1P48048 391 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 GATMP50440 423 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 KLF1Q13351 362 aaPredicted RBP19.37■□□□□ 0.69
USP39-201ENST00000323701 PLEKHG4Q58EX7 1191 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 MFSD7Q6UXD7 560 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 RXFP2Q8WXD0 754 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 RHOBTB2Q9BYZ6 727 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 DNAJB4Q9UDY4 337 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 NFU1Q9UMS0 254 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 TSC2P49815 1807 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 ENPP3O14638 875 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 PHF2O75151 1096 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 EOMESO95936 686 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 FAM153BP0C7A2 387 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 SETSIPP0DME0 302 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 LCP1P13796 627 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 TFE3P19532 575 aaPredicted RBP19.36■□□□□ 0.69
USP39-201ENST00000323701 ECHS1P30084 290 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 PTGIRP43119 386 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 RPL34P49207 117 aaKnown RBP19.36■□□□□ 0.69
USP39-201ENST00000323701 FAM153CQ494X1 144 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 EXD1Q8NHP7 514 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 STK32AQ8WU08 396 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 MAGOHBQ96A72 148 aaKnown RBP19.36■□□□□ 0.69
USP39-201ENST00000323701 CFAP57Q96MR6 1250 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 PEBP4Q96S96 227 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 ZWILCHQ9H900 591 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 CHST7Q9NS84 486 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 HCSTQ9UBK5 93 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 PCSK1NQ9UHG2 260 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 FAM153AQ9UHL3 310 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 GOLGA6L10A0A0M3HER8 536 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 ZNF143P52747 638 aaPredicted RBP19.36■□□□□ 0.69
USP39-201ENST00000323701 CCL23P55773 120 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 SLC6A3Q01959 620 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 BFSP2Q13515 415 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 GLB1LQ6UWU2 654 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 PIGZQ86VD9 579 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 TMEM86AQ8N2M4 240 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 PCED1BQ96HM7 432 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 SLITRK1Q96PX8 696 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 TMEM209Q96SK2 561 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 SYT15Q9BQS2 421 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 TBC1D13Q9NVG8 400 aa19.36■□□□□ 0.69
USP39-201ENST00000323701 C3orf70A6NLC5 250 aaPredicted RBP19.35■□□□□ 0.69
USP39-201ENST00000323701 MAP2K7O14733 419 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 PDGFRAP16234 1089 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 MIPP30301 263 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 DSC1Q08554 894 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 CYP1B1Q16678 543 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 CDO1Q16878 200 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 CCDC14Q49A88 953 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 LRRC38Q5VT99 294 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 CLEC20AQ6ZU45 233 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 CYP4V2Q6ZWL3 525 aaPredicted RBP19.35■□□□□ 0.69
USP39-201ENST00000323701 RSPH1Q8WYR4 309 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 DUSP16Q9BY84 665 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 OSBPL8Q9BZF1 889 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 NEUROG2Q9H2A3 272 aa19.35■□□□□ 0.69
USP39-201ENST00000323701 KRT1P04264 644 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 CD48P09326 243 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 MCM3P25205 808 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 TNFRSF8P28908 595 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 PLA2G4AP47712 749 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 LHX1P48742 406 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 NDUFV1P49821 464 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 ATP11AP98196 1134 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 DR1Q01658 176 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 FAAP100Q0VG06 881 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 SNX1Q13596 522 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 NOMO2Q5JPE7 1267 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 SLC39A5Q6ZMH5 540 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 IFT20Q8IY31 132 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 KCNK16Q96T55 309 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 TRIM31Q9BZY9 425 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 M0QZQ0 153 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 PITPNM1O00562 1244 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 DAPK3O43293 454 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 FAM163BP0C2L3 166 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 GPD1P21695 349 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 CASP8Q14790 479 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 ZFYVE27Q5T4F4 411 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 CCDC137Q6PK04 289 aaKnown RBP19.34■□□□□ 0.69
USP39-201ENST00000323701 OR10T2Q8NGX3 314 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 PPP1R12CQ9BZL4 782 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 KRT82Q9NSB4 513 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 TMLHEQ9NVH6 421 aa19.34■□□□□ 0.69
USP39-201ENST00000323701 KIAA0100Q14667 2235 aaKnown RBP19.34■□□□□ 0.69
USP39-201ENST00000323701 HSPA6P17066 643 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 NPR3P17342 541 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 CYP2C18P33260 490 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 COILP38432 576 aaPredicted RBP19.33■□□□□ 0.69
USP39-201ENST00000323701 MAP3K7CLP57077 242 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 CLUL1Q15846 466 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 TRIM60Q495X7 471 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 KAZNQ674X7 775 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 CTU1Q7Z7A3 348 aaKnown RBP19.33■□□□□ 0.69
USP39-201ENST00000323701 LRRTM3Q86VH5 581 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 JAMLQ86YT9 394 aa19.33■□□□□ 0.69
USP39-201ENST00000323701 COLGALT2Q8IYK4 626 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms