RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 VDRP11473 427 aa15.33■□□□□ 0.05
TCOF1-201ENST00000323668 SKIV2L2P42285 1042 aaKnown RBP15.33■□□□□ 0.05
TCOF1-201ENST00000323668 BACE1P56817 501 aa15.33■□□□□ 0.05
TCOF1-201ENST00000323668 ZACNQ401N2 412 aa15.33■□□□□ 0.05
TCOF1-201ENST00000323668 SLITRK1Q96PX8 696 aa15.33■□□□□ 0.05
TCOF1-201ENST00000323668 VPS33BQ9H267 617 aa15.33■□□□□ 0.05
TCOF1-201ENST00000323668 EIF4BP23588 611 aaKnown RBP15.33■□□□□ 0.04
TCOF1-201ENST00000323668 PTPN11Q06124 597 aaPredicted RBP15.33■□□□□ 0.04
TCOF1-201ENST00000323668 POU5F1BQ06416 359 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 Q3C1V9 767 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 SPDYE2Q495Y8 402 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 TRABD2AQ86V40 505 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 METTL23Q86XA0 190 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 TNIP3Q96KP6 325 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 ZDHHC18Q9NUE0 388 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 PRAMEF18Q5VWM3 479 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 POTEAQ6S8J7 498 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 MPZL3Q6UWV2 235 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 DSTYKQ6XUX3 929 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 TMPRSS6Q8IU80 811 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 CYP39A1Q9NYL5 469 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 RPTORQ8N122 1335 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 C5P01031 1676 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 ARHGAP10A1A4S6 786 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 RXRBP28702 533 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 NCKAP1LP55160 1127 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 TAS2R40P59535 323 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 RXFP2Q8WXD0 754 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 APOPT1Q96IL0 206 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 TRPV6Q9H1D0 765 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 LRCH1Q9Y2L9 728 aa15.33■□□□□ 0.04
TCOF1-201ENST00000323668 KBTBD13C9JR72 458 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 NEMP1O14524 444 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 PFDN6O15212 129 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ADCY3O60266 1144 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 LYPLA2O95372 231 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 GH1P01241 217 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 NOMO3P69849 1222 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 RYBPQ8N488 228 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 CATSPER1Q8NEC5 780 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 PDZD8Q8NEN9 1154 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 SCG3Q8WXD2 468 aaKnown RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 BCAS3Q9H6U6 928 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 TAGLN3Q9UI15 199 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 KIAA1257Q9ULG3 409 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 AIM2O14862 343 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 HBP1O60381 514 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 GOLGA7BQ2TAP0 167 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 TRMT5Q32P41 509 aaKnown RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 FASTKD1Q53R41 847 aaKnown RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ZDHHC24Q6UX98 284 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 BRSK2Q8IWQ3 736 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ALLCQ8N6M5 410 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 SDCCAG3Q96C92 435 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 SHCBP1LQ9BZQ2 653 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 SAE1Q9UBE0 346 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 R3HDM2Q9Y2K5 976 aaKnown RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 MAGEB2O15479 319 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 PDGFRBP09619 1106 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ALADP13716 330 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 DSG1Q02413 1049 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 SLC34A1Q06495 639 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 FAAP100Q0VG06 881 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 BMPR2Q13873 1038 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 PIGWQ7Z7B1 504 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 PHF13Q86YI8 300 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 MFSD14AQ96MC6 490 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 SRPK1Q96SB4 655 aaKnown RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 MMP19Q99542 508 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 GLRA3O75311 464 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ZNF189O75820 626 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 SPIRE1Q08AE8 756 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 BIRC2Q13490 618 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ZNF268Q14587 947 aaPredicted RBP15.32■□□□□ 0.04
TCOF1-201ENST00000323668 PDK1Q15118 436 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ZPBP2Q6X784 338 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 PPP1R36Q96LQ0 422 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ZNF560Q96MR9 790 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 FSD1LQ9BXM9 530 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 GPATCH2LQ9NWQ4 482 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 MCM8Q9UJA3 840 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
TCOF1-201ENST00000323668 ATP9AO75110 1047 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 RPL7AP62424 266 aaKnown RBP15.31■□□□□ 0.04
TCOF1-201ENST00000323668 BNIP1Q12981 228 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 VSIG10LQ86VR7 867 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 CEP70Q8NHQ1 597 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 HELQQ8TDG4 1101 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 OXNAD1Q96HP4 312 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-201ENST00000323668 C10orf88Q9H8K7 445 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 SNED1Q8TER0 1413 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 VWA5AO00534 786 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 ENO3P13929 434 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-201ENST00000323668 SULT1E1P49888 294 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 APBB2Q92870 758 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 ASTN2O75129 1339 aaPredicted RBP15.31■□□□□ 0.04
TCOF1-201ENST00000323668 E2F8A0AVK6 867 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 APOC4-APOC2K7ER74 178 aa15.31■□□□□ 0.04
TCOF1-201ENST00000323668 ALOX15BO15296 676 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms