RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 VSIG10LQ86VR7 867 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 EGFL6Q8IUX8 553 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 FAM13CQ8NE31 585 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 PGBD4Q96DM1 585 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 SIX2Q9NPC8 291 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 PCDHA3Q9Y5H8 950 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 OGTO15294 1046 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 PGM3O95394 542 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 GSTA2P09210 222 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 ADRA1DP25100 572 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 ABCG1P45844 678 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 NRLP54845 237 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 SLC12A1Q13621 1099 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 TMEM132BQ14DG7 1078 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 SURF1Q15526 300 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 POU5F2Q8N7G0 328 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 PDZD8Q8NEN9 1154 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 DCLK3Q9C098 648 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 PSMC3IPQ9P2W1 217 aaPredicted RBP15.89■□□□□ 0.13
VARS2-201ENST00000321897 TIMM13Q9Y5L4 95 aaPredicted RBP15.89■□□□□ 0.13
VARS2-201ENST00000321897 MEI4A8MW99 385 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 RBAK-RBAKDNI3L0D1 243 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 HUS1O60921 280 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 FECHP22830 423 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 POU5F1BQ06416 359 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 LAMTOR4Q0VGL1 99 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 C15orf59Q2T9L4 293 aaPredicted RBP15.89■□□□□ 0.13
VARS2-201ENST00000321897 CCNJLQ8IV13 435 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 MAP4K3Q8IVH8 894 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 SCUBE3Q8IX30 993 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 LRRC57Q8N9N7 239 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 ATXN2LQ8WWM7 1075 aaKnown RBP15.89■□□□□ 0.13
VARS2-201ENST00000321897 OPTNQ96CV9 577 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 NINJ2Q9NZG7 142 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 PCDHA2Q9Y5H9 948 aa15.89■□□□□ 0.13
VARS2-201ENST00000321897 BCL9LQ86UU0 1499 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 TRIM49D1C9J1S8 452 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 DGKIO75912 1065 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 ESRRGP62508 458 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 LACTB2Q53H82 288 aaPredicted RBP15.88■□□□□ 0.13
VARS2-201ENST00000321897 CES3Q6UWW8 571 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 NPNTQ6UXI9 565 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 CKAP2Q8WWK9 683 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 TTC25Q96NG3 672 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 PDP2Q9P2J9 529 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 PACSIN3Q9UKS6 424 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 TELO2Q9Y4R8 837 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 AHCYL1O43865 530 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 CST3P01034 146 aaPredicted RBP15.88■□□□□ 0.13
VARS2-201ENST00000321897 GLRA2P23416 452 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 TYK2P29597 1187 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 DSG1Q02413 1049 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 ART3Q13508 389 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 TTC13Q8NBP0 860 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 CFHP08603 1231 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 BLMHQ13867 455 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 FAM71AQ8IYT1 594 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 ADAM32Q8TC27 787 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 UCMAQ8WVF2 138 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 SHC3Q92529 594 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 CNBD2Q96M20 576 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 MTFR1LQ9H019 292 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 UBP1Q9NZI7 540 aa15.88■□□□□ 0.13
VARS2-201ENST00000321897 BNIP3LO60238 219 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 BGNP21810 368 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 AKAP5P24588 427 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 GOLGA7BQ2TAP0 167 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 KCTD21Q4G0X4 260 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 ACBD5Q5T8D3 534 aaPredicted RBP15.87■□□□□ 0.13
VARS2-201ENST00000321897 DUPD1Q68J44 220 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 NDUFAF2Q8N183 169 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 ZNF513Q8N8E2 541 aaPredicted RBP15.87■□□□□ 0.13
VARS2-201ENST00000321897 AFG1LQ8WV93 481 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 PYGLP06737 847 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 PTPRAP18433 802 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 CYP2B6P20813 491 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 FOXD4Q12950 439 aaPredicted RBP15.87■□□□□ 0.13
VARS2-201ENST00000321897 MMRN1Q13201 1228 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 LRRC6Q86X45 466 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 MPP4Q96JB8 637 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 FBXO6Q9NRD1 293 aaPredicted RBP15.87■□□□□ 0.13
VARS2-201ENST00000321897 NMRK1Q9NWW6 199 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 C19orf81C9J6K1 198 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 ACAT1P24752 427 aaKnown RBP15.87■□□□□ 0.13
VARS2-201ENST00000321897 PIGHQ14442 188 aaPredicted RBP15.87■□□□□ 0.13
VARS2-201ENST00000321897 ECHDC2Q86YB7 292 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 MYLK4Q86YV6 388 aaPredicted RBP15.87■□□□□ 0.13
VARS2-201ENST00000321897 TRIM42Q8IWZ5 723 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 FAM136AQ96C01 138 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 FAXDC2Q96IV6 333 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 TMEM120AQ9BXJ8 343 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 C2orf40Q9H1Z8 148 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 APPL1Q9UKG1 709 aa15.87■□□□□ 0.13
VARS2-201ENST00000321897 FAM200BP0CF97 657 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 STAG3L1P0CL83 205 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 GARTP22102 1010 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 CASP2P42575 452 aa15.86■□□□□ 0.13
VARS2-201ENST00000321897 MMP14P50281 582 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms