RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 C19orf81C9J6K1 198 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 B4GALT4O60513 344 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 SPAG6O75602 509 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 PIAS1O75925 651 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 ENDOD1O94919 500 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 C1QAP02745 245 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 ATXN8OSP0DMR3 200 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 RPS12P25398 132 aaKnown RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 MARK3P27448 753 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 EIF3EP60228 445 aaKnown RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 PSMC1P62191 440 aaKnown RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 TRPC3Q13507 836 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 DPYSL3Q14195 570 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 ACAP1Q15027 740 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 PRKD1Q15139 912 aaPredicted RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 TAF11Q15544 211 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 BBS9Q3SYG4 887 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 FAM91A1Q658Y4 838 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 DCAF15Q66K64 600 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 IGDCC3Q8IVU1 814 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 PALM2Q8IXS6 379 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLK1-201ENST00000321356 FAM71DQ8N9W8 422 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 FBXO41Q8TF61 875 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 SKA1Q96BD8 255 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 NAF1Q96HR8 494 aaKnown RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 APOPT1Q96IL0 206 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 CPXM1Q96SM3 734 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 TRIM55Q9BYV6 548 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 BCO2Q9BYV7 579 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 TRIM6Q9C030 488 aaPredicted RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 KCNK13Q9HB14 408 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 PTPRHQ9HD43 1115 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 CNTN3Q9P232 1028 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 XPO7Q9UIA9 1087 aaKnown RBP9.11□□□□□ -0.95
CLK1-201ENST00000321356 TEX264Q9Y6I9 313 aa9.11□□□□□ -0.95
CLK1-201ENST00000321356 WDR90Q96KV7 1748 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 TCRBV9S1A1TA0A576 114 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 WDR91A4D1P6 747 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 MCF2LO15068 1137 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 MED7O43513 233 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 MT-ND3P03897 115 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 PRKCBP05771 671 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 RBP3P10745 1247 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 PAX7P23759 505 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 EDNRBP24530 442 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 MIPP30301 263 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 GCKP35557 465 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 GABRB2P47870 512 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 RAD23BP54727 409 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 CNTN2Q02246 1040 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 LAMTOR4Q0VGL1 99 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 PTK7Q13308 1070 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 KCNJ11Q14654 390 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 NOMO1Q15155 1222 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 SEPT7Q16181 437 aaKnown RBP9.1□□□□□ -0.95
CLK1-201ENST00000321356 IER5Q5VY09 327 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 FAM160B1Q5W0V3 765 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 C4orf50Q6ZRC1 276 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 EMC1Q8N766 993 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.1□□□□□ -0.95
CLK1-201ENST00000321356 CHST13Q8NET6 341 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 MCRS1Q96EZ8 462 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 SERAC1Q96JX3 654 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 TCHPQ9BT92 498 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 TUBB6Q9BUF5 446 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 TSSK1BQ9BXA7 367 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 CADM1Q9BY67 442 aaKnown RBP9.1□□□□□ -0.95
CLK1-201ENST00000321356 C12orf65Q9H3J6 166 aaKnown RBP9.1□□□□□ -0.95
CLK1-201ENST00000321356 RSAD1Q9HA92 442 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 PNPLA8Q9NP80 782 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 PICK1Q9NRD5 415 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 METTL5Q9NRN9 209 aaKnown RBP9.1□□□□□ -0.95
CLK1-201ENST00000321356 HACL1Q9UJ83 578 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 DCTN4Q9UJW0 460 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 CORO1CQ9ULV4 474 aaPredicted RBP9.1□□□□□ -0.95
CLK1-201ENST00000321356 POLIQ9UNA4 740 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 CHMP2BQ9UQN3 213 aa9.1□□□□□ -0.95
CLK1-201ENST00000321356 IGKV6-21A0A0C4DH24 114 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 IQANK1A0A1B0GTG1 560 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 A6NHS1 94 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 GOLGA8RI6L899 631 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 KLF11O14901 512 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 GAS2O43903 313 aaKnown RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 LPXNO60711 386 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 CCDC22O60826 627 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 ENTPD5O75356 428 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 ECM2O94769 699 aaPredicted RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 HAUS5O94927 633 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 TRUB2O95900 331 aaKnown RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 LMNAP02545 664 aaKnown RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 TNNC2P02585 160 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 ERBB2P04626 1255 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 DLDP09622 509 aaKnown RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 ATP6V1C1P21283 382 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 STIP1P31948 543 aaKnown RBP9.09□□□□□ -0.95
CLK1-201ENST00000321356 PCK1P35558 622 aa9.09□□□□□ -0.95
CLK1-201ENST00000321356 ELK3P41970 407 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms