RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 DDX43Q9NXZ2 648 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 KCND2Q9NZV8 630 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 MYOCOSA0A1B0GUC4 107 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 TRIM49D1C9J1S8 452 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 KBTBD13C9JR72 458 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 ATP6V1B1P15313 513 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 ITGB5P18084 799 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 CRABP2P29373 138 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 OTUD4Q01804 1114 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 UGCGQ16739 394 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 PABPC1LQ4VXU2 614 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 BRDTQ58F21 947 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 XKR9Q5GH70 373 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 TCHHL1Q5QJ38 904 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 RNF111Q6ZNA4 994 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 PDIK1LQ8N165 341 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 FAM71DQ8N9W8 422 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 FEZF2Q8TBJ5 459 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 TEKT1Q969V4 418 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 APOPT1Q96IL0 206 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 GCNAQ96QF7 691 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 MRPL47Q9HD33 250 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 PHF24Q9UPV7 400 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 COMMD3-BMI1R4GMX3 469 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 TCRBV9S1A1TA0A576 114 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 MAGEC1O60732 1142 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 YWHABP31946 246 aaKnown RBP10.08□□□□□ -0.8
PTPRA-202ENST00000318266 ETV4P43268 484 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 NOMO3P69849 1222 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-202ENST00000318266 OASLQ15646 514 aaKnown RBP10.08□□□□□ -0.8
PTPRA-202ENST00000318266 PRR5LQ6MZQ0 368 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 RCOR2Q8IZ40 523 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPRA-202ENST00000318266 SNRNP27Q8WVK2 155 aaKnown RBP10.08□□□□□ -0.8
PTPRA-202ENST00000318266 TRIM11Q96F44 468 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 FAM210AQ96ND0 272 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 OLFM3Q96PB7 478 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 MMP19Q99542 508 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 SENP7Q9BQF6 1050 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 TMEM165Q9HC07 324 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 TAGLN3Q9UI15 199 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 ADAMTS6Q9UKP5 1117 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 TBX20Q9UMR3 447 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 LOC100653049A0A140TA62 436 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 CST8O60676 142 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 ZMPSTE24O75844 475 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 KRT34O76011 436 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 RPL22P35268 128 aaKnown RBP10.08□□□□□ -0.8
PTPRA-202ENST00000318266 ACOT2P49753 483 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 WNT7BP56706 349 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 GTF2BQ00403 316 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 OGDHQ02218 1023 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 SPP2Q13103 211 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 MAP7Q14244 749 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 CYP4A22Q5TCH4 519 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 SCARA3Q6AZY7 606 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 DENND5BQ6ZUT9 1274 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 DHDDSQ86SQ9 333 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 PPIL6Q8IXY8 311 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 KLHL23Q8NBE8 558 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 IL31RAQ8NI17 732 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 GDPD5Q8WTR4 605 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 LRRN4Q8WUT4 740 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 TRIM56Q9BRZ2 755 aaKnown RBP10.08□□□□□ -0.8
PTPRA-202ENST00000318266 APOL6Q9BWW8 343 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 C20orf27Q9GZN8 174 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 PCDH9Q9HC56 1237 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 KCNH7Q9NS40 1196 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 PLA2G4CQ9UP65 541 aa10.08□□□□□ -0.8
PTPRA-202ENST00000318266 hCG_1818297A0A087WSY0 165 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 IQANK1A0A1B0GTG1 560 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 CAPN14A8MX76 684 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 F8W8V4 182 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 BUD23O43709 281 aaKnown RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 STAT2P52630 851 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 BPIFB4P59827 614 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ZNF200P98182 395 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 SP4Q02446 784 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 CYP24A1Q07973 514 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ZNF252P-AS1Q0IIN9 211 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PTP4A2Q12974 167 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 HIC1Q14526 733 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 TFDP3Q5H9I0 405 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 RABGAP1LQ5R372 815 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 FAXCQ5TGI0 409 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 PAOXQ6QHF9 649 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ACAD11Q709F0 780 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 UNC45BQ8IWX7 931 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 NLGN1Q8N2Q7 840 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 NME8Q8N427 588 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.07□□□□□ -0.86e-12■■■□□ 19.2
PTPRA-202ENST00000318266 ZNF516Q92618 1163 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ALKBH8Q96BT7 664 aaKnown RBP10.07□□□□□ -0.8
PTPRA-202ENST00000318266 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 TCEAL9Q9UHQ7 104 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 COQ4Q9Y3A0 265 aa10.07□□□□□ -0.8
PTPRA-202ENST00000318266 ZNFX1Q9P2E3 1918 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms