RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TMC2Q8TDI7 906 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 ZNF333Q96JL9 665 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 CFAP57Q96MR6 1250 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 MIPEPQ99797 713 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 C2CD2Q9Y426 696 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 SLC15A5A6NIM6 579 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 TRAFD1O14545 582 aaPredicted RBP18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 ABHD2P08910 425 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 CTGFP29279 349 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 TNFAIP2Q03169 654 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 TMEM62Q0P6H9 643 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 NR1H3Q13133 447 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 MORN1Q5T089 497 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 RNF220Q5VTB9 566 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 HHATQ5VTY9 493 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 TDRD10Q5VZ19 366 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 MTDHQ86UE4 582 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 MFN1Q8IWA4 741 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 THNSL1Q8IYQ7 743 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 HELQQ8TDG4 1101 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 STOML1Q9UBI4 398 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 ABT1Q9ULW3 272 aaKnown RBP18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 AKT3Q9Y243 479 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 ASB3Q9Y575 518 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 ADGRA2Q96PE1 1338 aa18.02■□□□□ 0.48
SCAMP4-201ENST00000316097 A0A087WZ62 844 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 LMNAP02545 664 aaKnown RBP18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 FGFR1P11362 822 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 SLC26A2P50443 739 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 ROR2Q01974 943 aaKnown RBP18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 CENPCQ03188 943 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 MAPK6Q16659 721 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 TMEM132AQ24JP5 1023 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 EEF1DP3Q658K8 133 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 LLGL2Q6P1M3 1020 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 C4orf50Q6ZRC1 276 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 RELL1Q8IUW5 271 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 DDX27Q96GQ7 796 aaKnown RBP18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 ACO2Q99798 780 aaKnown RBP18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 FDXACB1Q9BRP7 624 aaPredicted RBP18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 SETD4Q9NVD3 440 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 SMG5Q9UPR3 1016 aaKnown RBP18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 GINS2Q9Y248 185 aa18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.02■□□□□ 0.47
SCAMP4-201ENST00000316097 HTTP42858 3142 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 MANSC4A6NHS7 340 aaPredicted RBP18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 PIGRP01833 764 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 MMP3P08254 477 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 GJC1P36383 396 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 VHLP40337 213 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 MAP2K5Q13163 448 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 CRHR2Q13324 411 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 RCN1Q15293 331 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 C2CD6Q53TS8 623 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 OLFML2BQ68BL8 750 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 DSTYKQ6XUX3 929 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 ZCCHC9Q8N567 271 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 SH3TC2Q8TF17 1288 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 FAM136AQ96C01 138 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 IFT122Q9HBG6 1241 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 NUMBLQ9Y6R0 609 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 RCN2Q14257 317 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 FASTKD3Q14CZ7 662 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 SLC45A4Q5BKX6 768 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 SLFN12LQ6IEE8 588 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 C17orf99Q6UX52 265 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 TMEM192Q8IY95 271 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 MRPL4Q9BYD3 311 aaKnown RBP18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 VCXQ9H320 206 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 DCTN4Q9UJW0 460 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 EVPLQ92817 2033 aa18.01■□□□□ 0.47
SCAMP4-201ENST00000316097 KLF1Q13351 362 aaPredicted RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 PSMD6Q15008 389 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 SNX30Q5VWJ9 437 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 IRGCQ6NXR0 463 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 LVRNQ6Q4G3 990 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 CLNKQ7Z7G1 428 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 APLFQ8IW19 511 aaPredicted RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 ZBTB8OSQ8IWT0 167 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 CADM1Q9BY67 442 aaKnown RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 TLE6Q9H808 572 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 RPL26L1Q9UNX3 145 aaKnown RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 COQ4Q9Y3A0 265 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 MROH7Q68CQ1 1323 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 A0A1W2PPM1 405 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 FAM155AB1AL88 458 aaPredicted RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 C2CD2LO14523 706 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 TOM1L1O75674 476 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 VNN1O95497 513 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 C4BPAP04003 597 aaKnown RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 GPC3P51654 580 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 EFNA5P52803 228 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 PPP1R15BQ5SWA1 713 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 MARCH8Q5T0T0 291 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 GALNT15Q8N3T1 639 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 DDX1Q92499 740 aaKnown RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 ZNF75CPQ92670 426 aaPredicted RBP18■□□□□ 0.47
SCAMP4-201ENST00000316097 CPB2Q96IY4 423 aa18■□□□□ 0.47
SCAMP4-201ENST00000316097 ARHGAP39Q9C0H5 1083 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms