RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 POLR2BP30876 1174 aaKnown RBP26.54■■□□□ 1.84
HOXB3-201ENST00000311626 C15orf59Q2T9L4 293 aaPredicted RBP26.54■■□□□ 1.84
HOXB3-201ENST00000311626 C1orf228Q6PIY5 440 aa26.54■■□□□ 1.84
HOXB3-201ENST00000311626 CDT1Q9H211 546 aa26.54■■□□□ 1.84
HOXB3-201ENST00000311626 SLC24A2Q9UI40 661 aa26.54■■□□□ 1.84
HOXB3-201ENST00000311626 SSC5DA1L4H1 1573 aa26.54■■□□□ 1.84
HOXB3-201ENST00000311626 LACTBL1A8MY62 500 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 M0QYV0 167 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 KRT7P08729 469 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 ATP11CQ8NB49 1132 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 SPATA18Q8TC71 538 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 C10orf82Q8WW14 230 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 STRIP2Q9ULQ0 834 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 KAT6AQ92794 2004 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 USP2O75604 605 aaPredicted RBP26.53■■□□□ 1.84
HOXB3-201ENST00000311626 ALADP13716 330 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 SEPT7Q16181 437 aaKnown RBP26.53■■□□□ 1.84
HOXB3-201ENST00000311626 FAXCQ5TGI0 409 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 TLDC1Q6P9B6 456 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 POLNQ7Z5Q5 900 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 FBXO16Q8IX29 292 aaPredicted RBP26.53■■□□□ 1.84
HOXB3-201ENST00000311626 RFWD2Q8NHY2 731 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 SPATC1LQ9H0A9 340 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 PTPRHQ9HD43 1115 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 GPATCH2LQ9NWQ4 482 aa26.53■■□□□ 1.84
HOXB3-201ENST00000311626 T-ENOLP0DO92 83 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 ELK3P41970 407 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 FAM102AQ5T9C2 384 aaPredicted RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 JADE1Q6IE81 842 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 PTPRN2Q92932 1015 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 CPB2Q96IY4 423 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 RPF1Q9H9Y2 349 aaKnown RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 USP18Q9UMW8 372 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 GRM1Q13255 1194 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 TRNP1Q6NT89 227 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 EFCAB12Q6NXP0 572 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 DARS2Q6PI48 645 aaKnown RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 APOBEC3FQ8IUX4 373 aaKnown RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 DCAKDQ8WVC6 231 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 HEXIM2Q96MH2 286 aaKnown RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 GEMIN8Q9NWZ8 242 aaKnown RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 FAM155BO75949 473 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 DPYSL3Q14195 570 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 MXD4Q14582 209 aaPredicted RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 TAF1BQ53T94 588 aaPredicted RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 WDR78Q5VTH9 848 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 TSHZ1Q6ZSZ6 1077 aa26.52■■□□□ 1.84
HOXB3-201ENST00000311626 ZMYND8Q9ULU4 1186 aaPredicted RBP26.52■■□□□ 1.84
HOXB3-201ENST00000311626 FZD9O00144 591 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 TRUB2O95900 331 aaKnown RBP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 EDNRBP24530 442 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 YARSP54577 528 aaKnown RBP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 POTEAQ6S8J7 498 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 CCDC33Q8N5R6 958 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 SPATA33Q96N06 139 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 EBF2Q9HAK2 575 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 NKX1-2Q9UD57 310 aaPredicted RBP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 ACKR2O00590 384 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 PROZP22891 400 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 CDH6P55285 790 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 PTPN11Q06124 597 aaPredicted RBP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 GJC2Q5T442 439 aaPredicted RBP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 MAP1SQ66K74 1059 aaPredicted RBP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 ADGRD1Q6QNK2 874 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 PCGF5Q86SE9 256 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 MTDHQ86UE4 582 aaKnown RBP26.51■■□□□ 1.83
HOXB3-201ENST00000311626 LRRC6Q86X45 466 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 ADPGKQ9BRR6 497 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 C15orf41Q9Y2V0 281 aa26.51■■□□□ 1.83
HOXB3-201ENST00000311626 C2orf71A6NGG8 1288 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 PHBP35232 272 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 RGS7P49802 495 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 CLNS1AP54105 237 aaKnown RBP26.5■■□□□ 1.83
HOXB3-201ENST00000311626 RIOX2Q8IUF8 465 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 MZB1Q8WU39 189 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 ACSS3Q9H6R3 686 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 PDGFCQ9NRA1 345 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 TXLNGQ9NUQ3 528 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 SENP1Q9P0U3 644 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 EVPLQ92817 2033 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 SOCS7O14512 581 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 B4GALT4O60513 344 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 ATP11AP98196 1134 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 CCDC15Q0P6D6 951 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 PDIK1LQ8N165 341 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 SERAC1Q96JX3 654 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 LHX5Q9H2C1 402 aa26.5■■□□□ 1.83
HOXB3-201ENST00000311626 MED7O43513 233 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 RNF8O76064 485 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 EPHB2P29323 1055 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 YWHAGP61981 247 aaKnown RBP eCLIP26.49■■□□□ 1.83
HOXB3-201ENST00000311626 NLRP9Q7RTR0 991 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 CFAP36Q96G28 342 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 KANSL3Q9P2N6 904 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 EIF4E1BA6NMX2 242 aaKnown RBP26.49■■□□□ 1.83
HOXB3-201ENST00000311626 KBTBD13C9JR72 458 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 MCF2LO15068 1137 aa26.49■■□□□ 1.83
HOXB3-201ENST00000311626 STAG3L1P0CL83 205 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms