RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 POLG2Q9UHN1 485 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 BCL10O95999 233 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 WEE2P0C1S8 567 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 TKFCQ3LXA3 575 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 OTOAQ7RTW8 1153 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 WDR41Q9HAD4 459 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 MGAT4DA6NG13 374 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 NCK2O43639 380 aa16.02■□□□□ 0.16
HCFC1-201ENST00000310441 DCP1BQ8IZD4 617 aaKnown RBP16.02■□□□□ 0.16
HCFC1-201ENST00000310441 PIN4Q9Y237 131 aaKnown RBP16.02■□□□□ 0.16
HCFC1-201ENST00000310441 NCAM2O15394 837 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 CAPN1P07384 714 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 PRKAA2P54646 552 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 EID3Q8N140 333 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 AGAP3Q96P47 875 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 TMEM237Q96Q45 408 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 CCDC189A1A4V9 331 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 RNASEH1O60930 286 aaKnown RBP16.02■□□□□ 0.15
HCFC1-201ENST00000310441 ADRA2BP18089 450 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 MCAMP43121 646 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 RPS6P62753 249 aaKnown RBP16.02■□□□□ 0.15
HCFC1-201ENST00000310441 ZRANB3Q5FWF4 1079 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 MMADHCQ9H3L0 296 aaPredicted RBP16.02■□□□□ 0.15
HCFC1-201ENST00000310441 DYTNA2CJ06 578 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 FAM25AB3EWG3 89 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 FAM25CB3EWG5 89 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 FAM25GB3EWG6 89 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 ANXA6P08133 673 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 RBP1P09455 135 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 S100GP29377 79 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 FLT3P36888 993 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.15
HCFC1-201ENST00000310441 ZNF618Q5T7W0 954 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 UCMAQ8WVF2 138 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 ALG13Q9NP73 1137 aaKnown RBP16.02■□□□□ 0.15
HCFC1-201ENST00000310441 SLC39A10Q9ULF5 831 aa16.02■□□□□ 0.15
HCFC1-201ENST00000310441 TCN1P20061 433 aaPredicted RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 SH3RF3Q8TEJ3 882 aaPredicted RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 ADGRE3Q9BY15 652 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 C17orf75Q9HAS0 396 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 PRKCBP05771 671 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 GRK4P32298 578 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 RIN2Q8WYP3 895 aaPredicted RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 NEK6Q9HC98 313 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 CD3EAPO15446 510 aaKnown RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 PRKAB2O43741 272 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 NOTUMQ6P988 496 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 LRRC1Q9BTT6 524 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 ANTXR1Q9H6X2 564 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 CD209Q9NNX6 404 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 NCKIPSDQ9NZQ3 722 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 LIMA1Q9UHB6 759 aaKnown RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 PSMD12O00232 456 aaPredicted RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 RPS6KA5O75582 802 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 AP1S2P56377 157 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 KCNT1Q5JUK3 1230 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 WRNIP1Q96S55 665 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 MKNK1Q9BUB5 465 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 PDK2Q15119 407 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 CCDC144BQ3MJ40 725 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 DENND1BQ6P3S1 775 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 SGMS1Q86VZ5 419 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 SYNDIG1Q9H7V2 258 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 CYP26A1O43174 497 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 TNFAIP8O95379 198 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 GSTM1P09488 218 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 NOS3P29474 1203 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 DENND6AQ8IWF6 608 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 HNRNPLLQ8WVV9 542 aaKnown RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 USP6P35125 1406 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 PIK3CDO00329 1044 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 RHOBTB3O94955 611 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 CNPP09543 421 aaKnown RBP16.01■□□□□ 0.15
HCFC1-201ENST00000310441 CCDC130P13994 396 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 YWHAQP27348 245 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 IL1RL2Q9HB29 575 aa16.01■□□□□ 0.15
HCFC1-201ENST00000310441 RARBP10826 455 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 ODC1P11926 461 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 GPD1P21695 349 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 FAM98BQ52LJ0 330 aaKnown RBP16■□□□□ 0.15
HCFC1-201ENST00000310441 XKR3Q5GH77 459 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 FBXW10Q5XX13 1052 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 KLHL17Q6TDP4 642 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 REPS1Q96D71 796 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 MIEF1Q9NQG6 463 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 RHBDL2Q9NX52 303 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L15C9J2P7 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L13C9JLJ4 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L11C9JVI0 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L18D6R9N7 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L22D6RA61 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L17D6RBQ6 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L19D6RCP7 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L20D6RJB6 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 FAM200BP0CF97 657 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 USP17L24Q0WX57 530 aa16■□□□□ 0.15
HCFC1-201ENST00000310441 CDH18Q13634 790 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms