RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 TRIM4Q9C037 500 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 PCDH9Q9HC56 1237 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 ETAA1Q9NY74 926 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 SENP1Q9P0U3 644 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 FBXO40Q9UH90 709 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 CYTH4Q9UIA0 394 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 SHOC2Q9UQ13 582 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 NR2E3Q9Y5X4 410 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 SNCAIPQ9Y6H5 919 aa14.08□□□□□ -0.16
CCDC13-201ENST00000310232 C3orf70A6NLC5 250 aaPredicted RBP14.07□□□□□ -0.16
CCDC13-201ENST00000310232 BST1Q10588 318 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 LBRQ14739 615 aaKnown RBP14.07□□□□□ -0.16
CCDC13-201ENST00000310232 CCDC62Q6P9F0 684 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 RAPH1Q70E73 1250 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 SLC35B2Q8TB61 432 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 TRIM11Q96F44 468 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 IWS1Q96ST2 819 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 CALN1Q9BXU9 219 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 SMYD3Q9H7B4 428 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 SYNCQ9H7C4 482 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 PRR5-ARHGAP8B1AHC4 643 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 WDR64B1ANS9 1081 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 TRIM49D1C9J1S8 452 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 ICAM1P05362 532 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 MMP10P09238 476 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 SKIP12755 728 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 NPR1P16066 1061 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 ARHGAP8P85298 464 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 DPH6Q7L8W6 267 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 PPIL6Q8IXY8 311 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 GALNT15Q8N3T1 639 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 GSTCDQ8NEC7 633 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 GATA6Q92908 595 aa14.07□□□□□ -0.16
CCDC13-201ENST00000310232 MAP3K7O43318 606 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 PSMA2P25787 234 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 OSTNP61366 133 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 SLC25A3Q00325 362 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 LMNB2Q03252 620 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 CCDC124Q96CT7 223 aaKnown RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 SRPK1Q96SB4 655 aaKnown RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 ZNF184Q99676 751 aaPredicted RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 MTMR12Q9C0I1 747 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 TMX4Q9H1E5 349 aaPredicted RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 PIH1D1Q9NWS0 290 aaKnown RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 CPSF2Q9P2I0 782 aaKnown RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 SLC7A8Q9UHI5 535 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 SERPINA10Q9UK55 444 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 FZD1Q9UP38 647 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 SCINQ9Y6U3 715 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 COL11A2P13942 1736 aaPredicted RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 RNASEH1O60930 286 aaKnown RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 LRCH4O75427 683 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 LYPLA1O75608 230 aaPredicted RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 ITGAVP06756 1048 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 MYL6P60660 151 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 AP1B1Q10567 949 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 NCOA4Q13772 614 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 LPCAT4Q643R3 524 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 EBF3Q9H4W6 596 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 STX18Q9P2W9 335 aaKnown RBP14.06□□□□□ -0.16
CCDC13-201ENST00000310232 TRIP11Q15643 1979 aa14.06□□□□□ -0.16
CCDC13-201ENST00000310232 PEX10O60683 326 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 SLC18A1P54219 525 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 AQP5P55064 265 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 TMPRSS15P98073 1019 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 OCRLQ01968 901 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 ROR2Q01974 943 aaKnown RBP14.05□□□□□ -0.16
CCDC13-201ENST00000310232 CHI3L2Q15782 390 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 RALGPS1Q5JS13 557 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 RFX6Q8HWS3 928 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 UNC5BQ8IZJ1 945 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 DHRS4Q9BTZ2 278 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 VPS11Q9H270 941 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 VCXQ9H320 206 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 SMYD2Q9NRG4 433 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 EXTL3O43909 919 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 PDE5AO76074 875 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 LYNP07948 512 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 INHBAP08476 426 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 ANPEPP15144 967 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 CD1EP15812 388 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 PTGER2P43116 358 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 RTP1P59025 263 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 PRKCEQ02156 737 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 PTPN20Q4JDL3 420 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 ARHGEF16Q5VV41 709 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 DENND1BQ6P3S1 775 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 RNF111Q6ZNA4 994 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 ENOSF1Q7L5Y1 443 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 ZNF677Q86XU0 584 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 NETO2Q8NC67 525 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 NKD2Q969F2 451 aaPredicted RBP14.05□□□□□ -0.16
CCDC13-201ENST00000310232 PGLYRP2Q96PD5 576 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 MSTO1Q9BUK6 570 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 ASCC2Q9H1I8 757 aaPredicted RBP14.05□□□□□ -0.16
CCDC13-201ENST00000310232 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
CCDC13-201ENST00000310232 TCRBV5S1A1TA0A578 114 aa14.04□□□□□ -0.16
CCDC13-201ENST00000310232 GRAP2O75791 330 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms