RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 GSTA5Q7RTV2 222 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 GSPT2Q8IYD1 628 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 KCTD6Q8NC69 237 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PCED1BQ96HM7 432 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 MAK16Q9BXY0 300 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 RHOBTB2Q9BYZ6 727 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 DPH5Q9H2P9 285 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 DSEQ9UL01 958 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 TET1Q8NFU7 2136 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 NPR3P17342 541 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 MCM3P25205 808 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 TKTP29401 623 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 KRT81Q14533 505 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PPP1R7Q15435 360 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 CRYBG2Q8N1P7 616 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 RNF34Q969K3 372 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 MYLPFQ96A32 169 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 CFAP57Q96MR6 1250 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 EPB41L5Q9HCM4 733 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 NME7Q9Y5B8 376 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PCDHA3Q9Y5H8 950 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 MTA2O94776 668 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 TKTL1P51854 596 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PTP4A2Q12974 167 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 CTXN3Q4LDR2 81 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 SLC39A12Q504Y0 691 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 DCAF6Q58WW2 860 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 OTOP2Q7RTS6 562 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 ZNF598Q86UK7 904 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 CLEC4CQ8WTT0 213 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 C1orf54Q8WWF1 131 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PIWIL1Q96J94 861 aaKnown RBP11.69□□□□□ -0.54
TRIM59-201ENST00000309784 PNKPQ96T60 521 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 ABCB6Q9NP58 842 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 CDH9Q9ULB4 789 aa11.69□□□□□ -0.54
TRIM59-201ENST00000309784 SART1O43290 800 aaKnown RBP11.68□□□□□ -0.54
TRIM59-201ENST00000309784 CTNNA1P35221 906 aaKnown RBP11.68□□□□□ -0.54
TRIM59-201ENST00000309784 FLT3P36888 993 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 ACADSBP45954 432 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 VPS41P49754 854 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 VSNL1P62760 191 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 TRAF7Q6Q0C0 670 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 MAATS1Q7Z4T9 603 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 FAM35AQ86V20 835 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 NPAS4Q8IUM7 802 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 FUKQ8N0W3 1084 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 ACTRT1Q8TDG2 376 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 KCNK16Q96T55 309 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 TRAIPQ9BWF2 469 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 FAM124BQ9H5Z6 455 aaPredicted RBP11.68□□□□□ -0.54
TRIM59-201ENST00000309784 RALAP11233 206 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 CSF2RAP15509 400 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 CDH5P33151 784 aaPredicted RBP11.68□□□□□ -0.54
TRIM59-201ENST00000309784 FAM193AP78312 1265 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 SLC6A3Q01959 620 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 NME3Q13232 169 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRIM59-201ENST00000309784 CRTAC1Q9NQ79 661 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 NRP1O14786 923 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 KRT10P13645 584 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 TCF4P15884 667 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 GJA8P48165 433 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 CLCN6P51797 869 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 OGDHQ02218 1023 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 CLUL1Q15846 466 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 PKN2Q16513 984 aaKnown RBP11.68□□□□□ -0.54
TRIM59-201ENST00000309784 ARHGAP17Q68EM7 881 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 HDAC7Q8WUI4 952 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 DUSP16Q9BY84 665 aa11.68□□□□□ -0.54
TRIM59-201ENST00000309784 MRPL9Q9BYD2 267 aaKnown RBP11.68□□□□□ -0.54
TRIM59-201ENST00000309784 CCDC188H7C350 402 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 DCAF12L1Q5VU92 463 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 RFX6Q8HWS3 928 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 FAM172AQ8WUF8 416 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 RBM41Q96IZ5 413 aaKnown RBP11.67□□□□□ -0.54
TRIM59-201ENST00000309784 TMEM209Q96SK2 561 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 NRDE2Q9H7Z3 1164 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 ANKZF1Q9H8Y5 726 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 STIM2Q9P246 746 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 DMGDHQ9UI17 866 aaKnown RBP11.67□□□□□ -0.54
TRIM59-201ENST00000309784 RASAL2Q9UJF2 1139 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
TRIM59-201ENST00000309784 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
TRIM59-201ENST00000309784 KRT7P08729 469 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 KCNJ1P48048 391 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 LRRC26Q2I0M4 334 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 SLC13A5Q86YT5 568 aaPredicted RBP11.67□□□□□ -0.54
TRIM59-201ENST00000309784 IFT20Q8IY31 132 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 TTC16Q8NEE8 873 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 SMARCD1Q96GM5 515 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 HNRNPABQ99729 332 aaKnown RBP11.67□□□□□ -0.54
TRIM59-201ENST00000309784 OSBPL8Q9BZF1 889 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
TRIM59-201ENST00000309784 RAD51CO43502 376 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms