RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 ACO2Q99798 780 aaKnown RBP11.18□□□□□ -0.62
MUC4-201ENST00000308466 TRIM55Q9BYV6 548 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 SMYD3Q9H7B4 428 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 PNMA3Q9UL41 463 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 USP18Q9UMW8 372 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 ZNF541Q9H0D2 1346 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 IGF2BP3O00425 579 aaKnown RBP eCLIP11.18□□□□□ -0.62
MUC4-201ENST00000308466 MAFO75444 373 aaPredicted RBP11.18□□□□□ -0.62
MUC4-201ENST00000308466 RGS20O76081 388 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 IL18RAPO95256 599 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 GPD1P21695 349 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 MCL1Q07820 350 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 GPR162Q16538 588 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 BZW1Q7L1Q6 419 aaKnown RBP11.18□□□□□ -0.62
MUC4-201ENST00000308466 MON1BQ7L1V2 547 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 TMEM176AQ96HP8 235 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 FBXL18Q96ME1 805 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 SLITRK1Q96PX8 696 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 STRA6Q9BX79 667 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 FOXP3Q9BZS1 431 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 ZNF518BQ9C0D4 1074 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 TMEM134Q9H6X4 195 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 PDGFCQ9NRA1 345 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 DPP3Q9NY33 737 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 LSM8O95777 96 aaKnown RBP11.18□□□□□ -0.62
MUC4-201ENST00000308466 NFICP08651 508 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 TCF4P15884 667 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 GOLGA7BQ2TAP0 167 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 JADE1Q6IE81 842 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 PHF13Q86YI8 300 aaPredicted RBP11.18□□□□□ -0.62
MUC4-201ENST00000308466 REPS2Q8NFH8 660 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 BEST2Q8NFU1 509 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 JOSD2Q8TAC2 188 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 RSAD1Q9HA92 442 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 PTPRJQ12913 1337 aa11.18□□□□□ -0.62
MUC4-201ENST00000308466 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 LIASO43766 372 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 NPTXRO95502 500 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 MIPP30301 263 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 NDST1P52848 882 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 SESN2P58004 480 aaPredicted RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 RNASELQ05823 741 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 NME3Q13232 169 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 PLCB4Q15147 1175 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 CCDC14Q49A88 953 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 TWF2Q6IBS0 349 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 ZDHHC14Q8IZN3 488 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 PRDM16Q9HAZ2 1276 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 UBN1Q9NPG3 1134 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 ZFP69BQ9UJL9 534 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 SMG5Q9UPR3 1016 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 ZNF711Q9Y462 761 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 TMEM191CA6NGB0 347 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 APOL1O14791 398 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 GAS2O43903 313 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 DCTN3O75935 186 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 MTA2O94776 668 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 ZNF280AP59817 542 aaPredicted RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 MORF4L2Q15014 288 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 C15orf59Q2T9L4 293 aaPredicted RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 TSNAXIP1Q2TAA8 658 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 LBX2Q6XYB7 198 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 RIOX2Q8IUF8 465 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 SIX6OS1Q8N1H7 587 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 DEPDC1BQ8WUY9 529 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 OSBPL7Q9BZF2 842 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 MMADHCQ9H3L0 296 aaPredicted RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 LRRC4CQ9HCJ2 640 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 SENP1Q9P0U3 644 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 RGS17Q9UGC6 210 aaPredicted RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 ZC3H7BQ9UGR2 993 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 PHTF1Q9UMS5 762 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 PIN4Q9Y237 131 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 DYTNA2CJ06 578 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 TTLL13PA6NNM8 815 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 MAGEB2O15479 319 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 HUS1O60921 280 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 EIF4BP23588 611 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 ARL2P36404 184 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 RAB27AP51159 221 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 WNT7BP56706 349 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 GEMIN4P57678 1058 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 POU5F1Q01860 360 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 PTK7Q13308 1070 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 HEATR6Q6AI08 1181 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 PLEKHA7Q6IQ23 1121 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 SCUBE3Q8IX30 993 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 TFAP2BQ92481 460 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 DDX1Q92499 740 aaKnown RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 CDKL2Q92772 493 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 TLCD1Q96CP7 247 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 GCOM2Q9BZD3 368 aaPredicted RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 CDT1Q9H211 546 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 AFG3L2Q9Y4W6 797 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 MAFBQ9Y5Q3 323 aaPredicted RBP11.17□□□□□ -0.62
MUC4-201ENST00000308466 RPS6KL1Q9Y6S9 549 aa11.17□□□□□ -0.62
MUC4-201ENST00000308466 M0QZ92 97 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms