RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 IL1R2P27930 398 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 ACTN2P35609 894 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 MTMR3Q13615 1198 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 SH3PXD2AQ5TCZ1 1133 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 TRNP1Q6NT89 227 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 LRIG3Q6UXM1 1119 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 C3orf58Q8NDZ4 430 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 SLC2A14Q8TDB8 520 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 PCSK1NQ9UHG2 260 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 ATP8A1Q9Y2Q0 1164 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 TIMM13Q9Y5L4 95 aaPredicted RBP23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 RPLP2P05387 115 aaKnown RBP23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 KLF1Q13351 362 aaPredicted RBP23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 RAB6CQ53S08 254 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 LIMS2Q7Z4I7 341 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 CRYBG2Q8N1P7 616 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 SLITRK1Q96PX8 696 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 TXLNGYQ9BZA5 131 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 MIS12Q9H081 205 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 RAB6CQ9H0N0 254 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 SLC38A7Q9NVC3 462 aa23.61■■□□□ 1.37
PDLIM2-202ENST00000308354 A0A1W2PQ45 241 aaPredicted RBP23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 A0A1W2PQY0 241 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 PPFIA2O75334 1257 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 ZNF844Q08AG5 666 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 GIT1Q9Y2X7 761 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 LRRD1A4D1F6 860 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 FKTNO75072 461 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 CKBP12277 381 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 GRK4P32298 578 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 SLC25A11Q02978 314 aaKnown RBP23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 DSC3Q14574 896 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 ODF2Q5BJF6 829 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 ARHGAP17Q68EM7 881 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 LEKR1Q6ZMV7 388 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 MRPL10Q7Z7H8 261 aaKnown RBP23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 RCOR2Q8IZ40 523 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 FNIP1Q8TF40 1166 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 RUNDC3BQ96NL0 473 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 INPP5FQ9Y2H2 1132 aa23.6■■□□□ 1.37
PDLIM2-202ENST00000308354 MOXD2PA6NHM9 499 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 ECEL1O95672 775 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 TKTP29401 623 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 ZSCAN26Q16670 478 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 PAN2Q504Q3 1202 aaKnown RBP23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 LRRC38Q5VT99 294 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 TOP6BLQ8N6T0 577 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 SH3TC2Q8TF17 1288 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 SENP8Q96LD8 212 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 SLC4A5Q9BY07 1137 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 STARD7Q9NQZ5 370 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 LCMT1Q9UIC8 334 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 PTCH2Q9Y6C5 1203 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 A0A0U1RQF3 1178 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 CDO1Q16878 200 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 C15orf59Q2T9L4 293 aaPredicted RBP23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 CLEC4CQ8WTT0 213 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 RXFP2Q8WXD0 754 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 ATP6V1G3Q96LB4 118 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 DCLK3Q9C098 648 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 CENPHQ9H3R5 247 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 RSAD1Q9HA92 442 aa23.59■■□□□ 1.37
PDLIM2-202ENST00000308354 PAPSS1O43252 624 aaPredicted RBP23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 SHOX2O60902 331 aaPredicted RBP23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 PDGFRAP16234 1089 aa23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 PPP1R7Q15435 360 aa23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 ANKRD52Q8NB46 1076 aa23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 B3GALNT2Q8NCR0 500 aa23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 RBM41Q96IZ5 413 aaKnown RBP23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 TMBIM4Q9HC24 238 aa23.58■■□□□ 1.37
PDLIM2-202ENST00000308354 GOLGA6L10A6NI86 522 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 I3L4J1 428 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 CLDN5O00501 218 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 GNRH1P01148 92 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 WARSP23381 471 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 MBTPS1Q14703 1052 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 KIAA0319Q5VV43 1072 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 OLFML1Q6UWY5 402 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 SPOCD1Q6ZMY3 1216 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 TMEM110Q86TL2 294 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 ZNF784Q8NCA9 323 aaPredicted RBP23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 SLAIN1Q8ND83 568 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 CFAP57Q96MR6 1250 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 C2CD4BA6NLJ0 364 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 ZNF623O75123 536 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 MYZAPP0CAP1 466 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 LCP1P13796 627 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 GPD1P21695 349 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 MIPP30301 263 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 HNRNPH2P55795 449 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 ATP11AP98196 1134 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 BST2Q10589 180 aaKnown RBP23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 TRIP13Q15645 432 aaPredicted RBP23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 FAM26DQ5JW98 314 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 MAIP1Q8WWC4 291 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 TNIP3Q96KP6 325 aa23.57■■□□□ 1.36
PDLIM2-202ENST00000308354 RNF8O76064 485 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 ZNF143P52747 638 aaPredicted RBP23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 KRT17Q04695 432 aa23.56■■□□□ 1.36
PDLIM2-202ENST00000308354 TTC19Q6DKK2 380 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms