RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SLC41A1Q8IVJ1 513 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 CD302Q8IX05 232 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 FSIP1Q8NA03 581 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 LRRC15Q8TF66 581 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 HSPA12BQ96MM6 686 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 PNMA5Q96PV4 448 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 KIAA1522Q9P206 1035 aaPredicted RBP12.73□□□□□ -0.37
SMIM4-201ENST00000307106 STK24Q9Y6E0 443 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 CABIN1Q9Y6J0 2220 aa12.73□□□□□ -0.37
SMIM4-201ENST00000307106 KNTC1P50748 2209 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 OGTO15294 1046 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 PLS3P13797 630 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 GABRG2P18507 467 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 CYP2F1P24903 491 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 EIF2DP41214 584 aaKnown RBP12.72□□□□□ -0.37
SMIM4-201ENST00000307106 LIG4P49917 911 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 ZXDBP98169 803 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 KDSRQ06136 332 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 RAD51AP2Q09MP3 1159 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 RESTQ13127 1097 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 TMEM132DQ14C87 1099 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 DHCR24Q15392 516 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 FILIP1Q7Z7B0 1213 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 RGL4Q8IZJ4 473 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 TRIML1Q8N9V2 468 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 LEO1Q8WVC0 666 aaPredicted RBP12.72□□□□□ -0.37
SMIM4-201ENST00000307106 TIPINQ9BVW5 301 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 CCSER1Q9C0I3 900 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 ARHGEF4Q9NR80 690 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 CALCOCO1Q9P1Z2 691 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 PCOLCE2Q9UKZ9 415 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 TENM4Q6N022 2769 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 KALRNO60229 2985 aa12.72□□□□□ -0.37
SMIM4-201ENST00000307106 A0A0A0MRY4 1105 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 IGHV1OR15-9A0A0B4J2B8 117 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 TRABD2BA6NFA1 517 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 LEFTY2O00292 366 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 HNRNPDLO14979 420 aaKnown RBP12.71□□□□□ -0.37
SMIM4-201ENST00000307106 ATXN7O15265 892 aaPredicted RBP12.71□□□□□ -0.37
SMIM4-201ENST00000307106 GUCY2CP25092 1073 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 ABCG1P45844 678 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 PDE6CP51160 858 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 ATP2C1P98194 919 aaPredicted RBP12.71□□□□□ -0.37
SMIM4-201ENST00000307106 GRIK2Q13002 908 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 ZNF605Q86T29 641 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 C12orf40Q86WS4 652 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 MARCH9Q86YJ5 346 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 ADGRG2Q8IZP9 1017 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 NECAB1Q8N987 351 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 PIP4K2CQ8TBX8 421 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 SETD7Q8WTS6 366 aaKnown RBP12.71□□□□□ -0.37
SMIM4-201ENST00000307106 DCBLD2Q96PD2 775 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 FAM124BQ9H5Z6 455 aaPredicted RBP12.71□□□□□ -0.37
SMIM4-201ENST00000307106 ABCB6Q9NP58 842 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 SUSD2Q9UGT4 822 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 DERAQ9Y315 318 aa12.71□□□□□ -0.37
SMIM4-201ENST00000307106 PTPRQQ9UMZ3 2332 aa12.71□□□□□ -0.38
SMIM4-201ENST00000307106 KPNA7A9QM74 516 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 EPB41L2O43491 1005 aaKnown RBP12.7□□□□□ -0.38
SMIM4-201ENST00000307106 GNSP15586 552 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 GRIA2P42262 883 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 TNFRSF4P43489 277 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 PDIA5Q14554 519 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 SV2CQ496J9 727 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 TTC38Q5R3I4 469 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 KCNK18Q7Z418 384 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 MSTO1Q9BUK6 570 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 RAB34Q9BZG1 259 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 ZDHHC5Q9C0B5 715 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 TOR4AQ9NXH8 423 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 DPP3Q9NY33 737 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 CPSF3Q9UKF6 684 aaKnown RBP12.7□□□□□ -0.38
SMIM4-201ENST00000307106 CYP8B1Q9UNU6 501 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 RAI2Q9Y5P3 530 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 KNL1Q8NG31 2342 aa12.7□□□□□ -0.38
SMIM4-201ENST00000307106 PP2D1A8MPX8 630 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 H0YCG3 227 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 SLC9A3R1O14745 358 aaPredicted RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 SCAMP3O14828 347 aaKnown RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 ZNF217O75362 1048 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 ADH1CP00326 375 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 HOXB2P14652 356 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 PFKLP17858 780 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 ACAT1P24752 427 aaKnown RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 CDC25AP30304 524 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 NCKAP1LP55160 1127 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 INTS6LQ5JSJ4 861 aaKnown RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 SYCP2LQ5T4T6 812 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 RHBDF2Q6PJF5 856 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 TRMT11Q7Z4G4 463 aaKnown RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 SCN4BQ8IWT1 228 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 GALNT15Q8N3T1 639 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 ZNF513Q8N8E2 541 aaPredicted RBP12.69□□□□□ -0.38
SMIM4-201ENST00000307106 IGSF22Q8N9C0 903 aa12.69□□□□□ -0.38
SMIM4-201ENST00000307106 NSUN7Q8NE18 718 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms