RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 ALG3Q92685 438 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 KRT35Q92764 455 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 MYLPFQ96A32 169 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 UBXN6Q9BZV1 441 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 USTQ9Y2C2 406 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 LTBP2Q14767 1821 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 PAPSS1O43252 624 aaPredicted RBP18.44■□□□□ 0.54
KRT28-201ENST00000306658 PSTPIP1O43586 416 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 PSMA2P25787 234 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 SSR1P43307 286 aaKnown RBP18.44■□□□□ 0.54
KRT28-201ENST00000306658 MAP3K7CLP57077 242 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 WDR5P61964 334 aaKnown RBP18.44■□□□□ 0.54
KRT28-201ENST00000306658 OGDHQ02218 1023 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 ACAP1Q15027 740 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 FUT10Q6P4F1 479 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 C4orf50Q6ZRC1 276 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 RSRC2Q7L4I2 434 aaKnown RBP18.44■□□□□ 0.54
KRT28-201ENST00000306658 CEP57Q86XR8 500 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 CPNE8Q86YQ8 564 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 DCP1BQ8IZD4 617 aaKnown RBP18.44■□□□□ 0.54
KRT28-201ENST00000306658 NAP1L3Q99457 506 aaPredicted RBP18.44■□□□□ 0.54
KRT28-201ENST00000306658 PKMYT1Q99640 499 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.44■□□□□ 0.54
KRT28-201ENST00000306658 LRRC4Q9HBW1 653 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 MARCH5Q9NX47 278 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 HCSTQ9UBK5 93 aa18.44■□□□□ 0.54
KRT28-201ENST00000306658 TTC7AQ9ULT0 858 aaPredicted RBP18.44■□□□□ 0.54
KRT28-201ENST00000306658 PGRMC1O00264 195 aaKnown RBP18.43■□□□□ 0.54
KRT28-201ENST00000306658 GABBR2O75899 941 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 BEST1O76090 585 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 ACRP10323 421 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 LCP1P13796 627 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 DESP17661 470 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 RNASE9P60153 205 aaKnown RBP18.43■□□□□ 0.54
KRT28-201ENST00000306658 ZNF252P-AS1Q0IIN9 211 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 PPIGQ13427 754 aaKnown RBP eCLIP18.43■□□□□ 0.54
KRT28-201ENST00000306658 ERCC6LQ2NKX8 1250 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 VARS2Q5ST30 1063 aaKnown RBP18.43■□□□□ 0.54
KRT28-201ENST00000306658 TEX35Q5T0J7 233 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 SEL1L2Q5TEA6 688 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 CC2D1AQ6P1N0 951 aaPredicted RBP18.43■□□□□ 0.54
KRT28-201ENST00000306658 SPATA4Q8NEY3 305 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 ZNF689Q96CS4 500 aaPredicted RBP18.43■□□□□ 0.54
KRT28-201ENST00000306658 RNPC3Q96LT9 517 aaKnown RBP18.43■□□□□ 0.54
KRT28-201ENST00000306658 GPR62Q9BZJ7 368 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.43■□□□□ 0.54
KRT28-201ENST00000306658 TMEM59LQ9UK28 342 aa18.43■□□□□ 0.54
KRT28-201ENST00000306658 V9GYY5 206 aaPredicted RBP18.43■□□□□ 0.54
KRT28-201ENST00000306658 CARNS1A5YM72 827 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 NT5C1B-RDH14C9J2C7 533 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 F8VP50 259 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 DYNC1I1O14576 645 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 FGFR3P22607 806 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 MARCKSL1P49006 195 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 ZNF143P52747 638 aaPredicted RBP18.42■□□□□ 0.54
KRT28-201ENST00000306658 DEFB103AP81534 67 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 LRRC38Q5VT99 294 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 DCAF12L1Q5VU92 463 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 ARCQ7LC44 396 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 LRRTM3Q86VH5 581 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 SPATA2LQ8IUW3 424 aaPredicted RBP18.42■□□□□ 0.54
KRT28-201ENST00000306658 EMC1Q8N766 993 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 SMOQ99835 787 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 CWH43Q9H720 699 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 CSNK1G1Q9HCP0 422 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 ASNSD1Q9NWL6 643 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 EHD2Q9NZN4 543 aa18.42■□□□□ 0.54
KRT28-201ENST00000306658 OR6C75A6NL08 312 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 RNF8O76064 485 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 PDGFRAP16234 1089 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 GPD1P21695 349 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 MRPL58Q14197 206 aaKnown RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 CTXN3Q4LDR2 81 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 EFHC1Q5JVL4 640 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 SPOUT1Q5T280 376 aaKnown RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 ZNF280DQ6N043 979 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 SLC26A9Q7LBE3 791 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 SIX6OS1Q8N1H7 587 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 TMEM209Q96SK2 561 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 CNPY3Q9BT09 278 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 OXCT2Q9BYC2 517 aaPredicted RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 ZCWPW1Q9H0M4 648 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 TMLHEQ9NVH6 421 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 SMARCAL1Q9NZC9 954 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 C2CD4BA6NLJ0 364 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 H7C4K7 107 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 FBXO21O94952 628 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 FGBP02675 491 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 FGGP02679 453 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 BDNFP23560 247 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 PBX3P40426 434 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 FPGSQ05932 587 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 ADIGQ0VDE8 80 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 ZNF211Q13398 564 aaPredicted RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 NFE2Q16621 373 aaPredicted RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 HADHQ16836 314 aaKnown RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 FAM117BQ6P1L5 589 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 OTOP2Q7RTS6 562 aa18.41■□□□□ 0.54
KRT28-201ENST00000306658 CMTR2Q8IYT2 770 aaKnown RBP18.41■□□□□ 0.54
KRT28-201ENST00000306658 RXFP2Q8WXD0 754 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms