RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 FAM8A1Q9UBU6 413 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 CHORDC1Q9UHD1 332 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-202ENST00000306042 ADAM28Q9UKQ2 775 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 SLC27A5Q9Y2P5 690 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 WNT7AO00755 349 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 SPTLC1O15269 473 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 ITGBL1O95965 494 aaPredicted RBP9.66□□□□□ -0.86
PTPRE-202ENST00000306042 F2P00734 622 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 GYPCP04921 128 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 SPATA31D3P0C874 917 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 HECTD3Q5T447 861 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 KLC3Q6P597 504 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 SPATA31D4Q6ZUB0 917 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 ZDHHC17Q8IUH5 632 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 C1orf54Q8WWF1 131 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 CNPY3Q9BT09 278 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 DNAJC17Q9NVM6 304 aaKnown RBP9.66□□□□□ -0.86
PTPRE-202ENST00000306042 CDY1Q9Y6F8 540 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 GOLGA8MH3BSY2 632 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 PSMD3O43242 534 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 ADRB2P07550 413 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 STX2P32856 288 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 SP2Q02086 613 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 IRF5Q13568 498 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 MTFR1Q15390 333 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 P3H1Q32P28 736 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 B3GALNT2Q8NCR0 500 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 PPP1R2P1Q96PQ5 205 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.66□□□□□ -0.86
PTPRE-202ENST00000306042 TMEM51Q9NW97 253 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 MYH14Q7Z406 1995 aaKnown RBP9.66□□□□□ -0.86
PTPRE-202ENST00000306042 ERICH4A6NGS2 130 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 FAM47DPA6NHR8 397 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 MICAL2O94851 1124 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 CHRNA3P32297 505 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 SMARCB1Q12824 385 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 BRD3Q15059 726 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 DCLK2Q8N568 766 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 C4orf32Q8N8J7 132 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 MGARPQ8TDB4 240 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 TMA16Q96EY4 203 aaKnown RBP9.66□□□□□ -0.86
PTPRE-202ENST00000306042 TCF25Q9BQ70 676 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 PDZD7Q9H5P4 517 aa9.66□□□□□ -0.86
PTPRE-202ENST00000306042 A0A0B4J269 797 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 UBA6A0AVT1 1052 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 AP3B1O00203 1094 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 ATP9BO43861 1147 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 KRT14P02533 472 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 GZMAP12544 262 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 AKT1P31749 480 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 CBX1P83916 185 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 MAP3K10Q02779 954 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 PPARDQ03181 441 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 GPM6BQ13491 265 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 MAMDC4Q6UXC1 1216 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 ZNF557Q8N988 423 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SPPL2BQ8TCT7 592 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 USP13Q92995 863 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 PBXIP1Q96AQ6 731 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 C18orf25Q96B23 403 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 FMO2Q99518 471 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 EIF2AQ9BY44 585 aaKnown RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 GOLGA2P5Q9HBQ8 144 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SAYSD1Q9NPB0 183 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 MARCH2Q9P0N8 246 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 PLAGL2Q9UPG8 496 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 NID2Q14112 1375 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 CFAP69A5D8W1 941 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 TSPAN3O60637 253 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 DNAJC6O75061 913 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 USP17L7P0C7H9 530 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 COMTP21964 271 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 MBTD1Q05BQ5 628 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 DHX9Q08211 1270 aaKnown RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 ASPHQ12797 758 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 MTF1Q14872 753 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 PCSK7Q16549 785 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 RETSATQ6NUM9 610 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 FUT10Q6P4F1 479 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 FRA10AC1Q70Z53 315 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SLC9A9Q8IVB4 645 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 RXFP2Q8WXD0 754 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SCG3Q8WXD2 468 aaKnown RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 BSNDQ8WZ55 320 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SNX19Q92543 992 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 RAPGEF5Q92565 580 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SNX24Q9Y343 169 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SLC30A1Q9Y6M5 507 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 CST8O60676 142 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 LTFP02788 710 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 SARSP49591 514 aaKnown RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 MCL1Q07820 350 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 PPP3CAQ08209 521 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 TAF1BQ53T94 588 aaPredicted RBP9.65□□□□□ -0.86
PTPRE-202ENST00000306042 ARSHQ5FYA8 562 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 C9orf57Q5W0N0 161 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 ARHGEF19Q8IW93 802 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 TOP6BLQ8N6T0 577 aa9.65□□□□□ -0.86
PTPRE-202ENST00000306042 MYLPFQ96A32 169 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms