RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 CDC42EP4Q9H3Q1 356 aaKnown RBP11.96□□□□□ -0.49
SCG2-201ENST00000305409 NEU2Q9Y3R4 380 aa11.96□□□□□ -0.49
SCG2-201ENST00000305409 GOLGA8MH3BSY2 632 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 SGK1O00141 431 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 PIRO00625 290 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 PTGESO14684 152 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 PAPSS1O43252 624 aaPredicted RBP11.96□□□□□ -0.5
SCG2-201ENST00000305409 RIPK2O43353 540 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 DUSP11O75319 330 aaKnown RBP11.96□□□□□ -0.5
SCG2-201ENST00000305409 CHRNA1P02708 482 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 MLH1P40692 756 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 GABRB2P47870 512 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 ARSEP51690 589 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 GDF10P55107 478 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 IFI35P80217 286 aaPredicted RBP11.96□□□□□ -0.5
SCG2-201ENST00000305409 CDC42EP1Q00587 391 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 OTUD4Q01804 1114 aaKnown RBP11.96□□□□□ -0.5
SCG2-201ENST00000305409 ZC3H12AQ5D1E8 599 aaKnown RBP11.96□□□□□ -0.5
SCG2-201ENST00000305409 CAPN12Q6ZSI9 719 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 NIPA2Q8N8Q9 360 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 ACTL9Q8TC94 416 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 SLC2A14Q8TDB8 520 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 C9orf72Q96LT7 481 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 RUNDC3BQ96NL0 473 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 GAD1Q99259 594 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 KATNAL1Q9BW62 490 aa11.96□□□□□ -0.5
SCG2-201ENST00000305409 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.96□□□□□ -0.5
SCG2-201ENST00000305409 C2CD4BA6NLJ0 364 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 BANF1O75531 89 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 RPS6KA5O75582 802 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 RNF8O76064 485 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 TRUB2O95900 331 aaKnown RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 IGHA2P01877 340 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 CYBAP13498 195 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 PECAM1P16284 738 aaPredicted RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 GPD1P21695 349 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 CACNB2Q08289 660 aaPredicted RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 GPS1Q13098 491 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 HADHQ16836 314 aaKnown RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 LONRF1Q17RB8 773 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 PAN2Q504Q3 1202 aaKnown RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 LRRC38Q5VT99 294 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 APBB1IPQ7Z5R6 666 aaPredicted RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 OSTM1Q86WC4 334 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 RFX6Q8HWS3 928 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 GRK7Q8WTQ7 553 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 SLCO2A1Q92959 643 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 PAAF1Q9BRP4 392 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 ADAM33Q9BZ11 813 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 FAM107BQ9H098 131 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 AGO3Q9H9G7 860 aaKnown RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 MIOSQ9NXC5 875 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 HESX1Q9UBX0 185 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 GRIN2DO15399 1336 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 LAMA2P24043 3122 aaKnown RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 ANKRD65E5RJM6 399 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 CA12O43570 354 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 KLRC2P26717 231 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 TKTP29401 623 aaKnown RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 SEC24CP53992 1094 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 CDH6P55285 790 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 LILRA4P59901 499 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 MRPS6P82932 125 aaKnown RBP11.95□□□□□ -0.5
SCG2-201ENST00000305409 GAD2Q05329 585 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 CCDC14Q49A88 953 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 RHBDF2Q6PJF5 856 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 SLC35F5Q8WV83 523 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 SNX25Q9H3E2 840 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 WHRNQ9P202 907 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 WDR35Q9P2L0 1181 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 TLL2Q9Y6L7 1015 aa11.95□□□□□ -0.5
SCG2-201ENST00000305409 HMGB1P1B2RPK0 211 aaPredicted RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 I3L4J1 428 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 STAU1O95793 577 aaKnown RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 ASGR1P07306 291 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 GNAT1P11488 350 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 RARGP13631 454 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 ITIH2P19823 946 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 THPOP40225 353 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 ZNF143P52747 638 aaPredicted RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 INHBEP58166 350 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 SREBF2Q12772 1141 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 SF3A3Q12874 501 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCG2-201ENST00000305409 CA9Q16790 459 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 PKDCCQ504Y2 493 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 MFSD14CQ5VZR4 134 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 WSCD1Q658N2 575 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 OLFML1Q6UWY5 402 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 CTU1Q7Z7A3 348 aaKnown RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 ZC3H18Q86VM9 953 aaKnown RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 LRRC52Q8N7C0 313 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 APPL2Q8NEU8 664 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 KHSRPQ92945 711 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCG2-201ENST00000305409 MTG1Q9BT17 334 aaPredicted RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 ADAM7Q9H2U9 754 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 DDX56Q9NY93 547 aaKnown RBP11.94□□□□□ -0.5
SCG2-201ENST00000305409 CTNNAL1Q9UBT7 734 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 DERAQ9Y315 318 aa11.94□□□□□ -0.5
SCG2-201ENST00000305409 SYNJ2BP-COX16A0A087WUM0 186 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms