RNA–Protein interactions for RNA: ENST00000303521.10

SCAPER-201, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 5,438 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-201ENST00000303521 KRT81Q14533 505 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 TRIP13Q15645 432 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-201ENST00000303521 KYNUQ16719 465 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 MGAT5BQ3V5L5 792 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 IRAK1BP1Q5VVH5 260 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 CASC4Q6P4E1 433 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 ATP11CQ8NB49 1132 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 RBBP8NLQ8NC74 664 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-201ENST00000303521 SMG7Q92540 1137 aaKnown RBP6.65□□□□□ -1.35
SCAPER-201ENST00000303521 NSL1Q96IY1 281 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 KIFC3Q9BVG8 833 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 TRIM9Q9C026 710 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 SLC32A1Q9H598 525 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 SETD4Q9NVD3 440 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 CD207Q9UJ71 328 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 LRCH1Q9Y2L9 728 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 NFASCO94856 1347 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 A0A0A6YYK5 440 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-201ENST00000303521 MCF2LO15068 1137 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 GNSP15586 552 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 CD44P16070 742 aaKnown RBP6.65□□□□□ -1.35
SCAPER-201ENST00000303521 EN2P19622 333 aaPredicted RBP6.65□□□□□ -1.35
SCAPER-201ENST00000303521 YWHABP31946 246 aaKnown RBP6.65□□□□□ -1.35
SCAPER-201ENST00000303521 AP1B1Q10567 949 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 MEA1Q16626 185 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 MMEL1Q495T6 779 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 SLC44A4Q53GD3 710 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 MEI1Q5TIA1 1274 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 KAZNQ674X7 775 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 TTC13Q8NBP0 860 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.65□□□□□ -1.353e-9■■■■■ 78.5
SCAPER-201ENST00000303521 CFHR5Q9BXR6 569 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 SMARCAL1Q9NZC9 954 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 MYH7P12883 1935 aa6.65□□□□□ -1.35
SCAPER-201ENST00000303521 WDR91A4D1P6 747 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 EOMESO95936 686 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 NR3C1P04150 777 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 PPARGP37231 505 aaPredicted RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 SLC1A1P43005 524 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 ART3Q13508 389 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 RIPK1Q13546 671 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 LACTB2Q53H82 288 aaPredicted RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 TATDN2Q93075 761 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 DCLK3Q9C098 648 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 RPL26L1Q9UNX3 145 aaKnown RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 TRIM33Q9UPN9 1127 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 SATB2Q9UPW6 733 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 F8VZ95 297 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 PJA2O43164 708 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 TOM1L1O75674 476 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 CASP7P55210 303 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 ITGB3BPQ13352 177 aaPredicted RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 SYCP2LQ5T4T6 812 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 USP17L6PQ6QN14 398 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 ZNF564Q8TBZ8 553 aaPredicted RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 DNAJB3Q8WWF6 145 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 SEPT5Q99719 369 aaPredicted RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 LXNQ9BS40 222 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 UPF3AQ9H1J1 476 aaKnown RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 NKX2-4Q9H2Z4 354 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 USP18Q9UMW8 372 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 LAMTOR5O43504 91 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 KRT38O76015 456 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 FNTAP49354 379 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 TAF6P49848 677 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 KNOP1Q1ED39 458 aaKnown RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 NT5DC4Q86YG4 428 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 RFX6Q8HWS3 928 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 TTC17Q96AE7 1141 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 SH3GL2Q99962 352 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 OSBPL8Q9BZF1 889 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 INTS2Q9H0H0 1204 aaKnown RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 ANLNQ9NQW6 1124 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 PSMC3IPQ9P2W1 217 aaPredicted RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 UBOX5O94941 541 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 CKBP12277 381 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 INSRRP14616 1297 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 GUCY1A2P33402 732 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 GRIK1P39086 918 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 KPNA2P52292 529 aaKnown RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 ZNF844Q08AG5 666 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 PRAMEF19Q5SWL8 479 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 IZUMO3Q5VZ72 239 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 DDX53Q86TM3 631 aaKnown RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 MDM1Q8TC05 714 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 INPP5DQ92835 1189 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 ATOH1Q92858 354 aaPredicted RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 PGM2Q96G03 612 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 MLXIPLQ9NP71 852 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 DMGDHQ9UI17 866 aaKnown RBP6.64□□□□□ -1.35
SCAPER-201ENST00000303521 GGT7Q9UJ14 662 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 GIT1Q9Y2X7 761 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 ZNF711Q9Y462 761 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 CAPN6Q9Y6Q1 641 aa6.64□□□□□ -1.35
SCAPER-201ENST00000303521 POTEFA5A3E0 1075 aa6.63□□□□□ -1.35
SCAPER-201ENST00000303521 ZNF263O14978 683 aa6.63□□□□□ -1.35
SCAPER-201ENST00000303521 LRRN2O75325 713 aa6.63□□□□□ -1.35
SCAPER-201ENST00000303521 PTPN4P29074 926 aa6.63□□□□□ -1.35
SCAPER-201ENST00000303521 ZNF211Q13398 564 aaPredicted RBP6.63□□□□□ -1.35
SCAPER-201ENST00000303521 PDIA5Q14554 519 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms