RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 CERKQ8TCT0 537 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 IPCEF1Q8WWN9 437 aaPredicted RBP12.8□□□□□ -0.36
ABCA3-201ENST00000301732 GFM2Q969S9 779 aaKnown RBP12.8□□□□□ -0.36
ABCA3-201ENST00000301732 GRIP2Q9C0E4 1043 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 RSPH9Q9H1X1 276 aaPredicted RBP12.8□□□□□ -0.36
ABCA3-201ENST00000301732 KIAA1586Q9HCI6 787 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 GRID1Q9ULK0 1009 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 A0A1W2PQC6 194 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 DYNC1LI2O43237 492 aaPredicted RBP12.8□□□□□ -0.36
ABCA3-201ENST00000301732 BBOX1O75936 387 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 PKNOX1P55347 436 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 CYP4F2P78329 520 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 CYP4F3Q08477 520 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 TTLL4Q14679 1199 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 TRIM71Q2Q1W2 868 aaKnown RBP12.8□□□□□ -0.36
ABCA3-201ENST00000301732 SGSM3Q96HU1 749 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 OLFM1Q99784 485 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 BCL2L14Q9BZR8 327 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 PRR12Q9ULL5 1215 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 PRG3Q9Y2Y8 225 aaPredicted RBP12.8□□□□□ -0.36
ABCA3-201ENST00000301732 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 EVPLLA8MZ36 301 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 F8W8V4 182 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 GGPS1O95749 300 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 AGKQ53H12 422 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 PERM1Q5SV97 790 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 AGBL2Q5U5Z8 902 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 FUT8Q9BYC5 575 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 BATF3Q9NR55 127 aa12.8□□□□□ -0.36
ABCA3-201ENST00000301732 TAF4O00268 1085 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 KRT76Q01546 638 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 PDPK2PQ6A1A2 396 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 AADACL2Q6P093 401 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 PRUNE1Q86TP1 453 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 FAM20AQ96MK3 541 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ATXN3LQ9H3M9 355 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 A0A0U1RQJ8 604 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 VAC14Q08AM6 782 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 COX10Q12887 443 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ARHGEF7Q14155 803 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 C10orf120Q5SQS8 335 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 POTEAQ6S8J7 498 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ST13P5Q8NFI4 369 aaPredicted RBP12.79□□□□□ -0.36
ABCA3-201ENST00000301732 TBCDQ9BTW9 1192 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ZFYVE1Q9HBF4 777 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 SNPHO15079 494 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 AP5Z1O43299 807 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 GLI1P08151 1106 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 C19orf18Q8NEA5 215 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 CPB2Q96IY4 423 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 MRPS26Q9BYN8 205 aaKnown RBP12.79□□□□□ -0.36
ABCA3-201ENST00000301732 VCPKMTQ9H867 229 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 PCDHA10Q9Y5I2 948 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 CDHR2Q9BYE9 1310 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 GPC1P35052 558 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 DALRD3Q5D0E6 543 aaKnown RBP12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 IZUMO1Q8IYV9 350 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 TPCN2Q8NHX9 752 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ANKS1AQ92625 1134 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 DTNBP1Q96EV8 351 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ACOX2Q99424 681 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 KLHL4Q9C0H6 718 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 VTA1Q9NP79 307 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 TMEM51Q9NW97 253 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 H7C1W4 665 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 M0QYT0 321 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 PRRG1O14668 218 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 SCAMP3O14828 347 aaKnown RBP12.79□□□□□ -0.36
ABCA3-201ENST00000301732 TRIM13O60858 407 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 FAM20BO75063 409 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 EYA4O95677 639 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ITGA4P13612 1032 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 FOXP4Q8IVH2 680 aaPredicted RBP12.79□□□□□ -0.36
ABCA3-201ENST00000301732 BBS7Q8IWZ6 715 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 SLC20A1Q8WUM9 679 aa12.79□□□□□ -0.36
ABCA3-201ENST00000301732 TARS2Q9BW92 718 aaKnown RBP12.79□□□□□ -0.36
ABCA3-201ENST00000301732 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
ABCA3-201ENST00000301732 OPLAHO14841 1288 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 TNFRSF21O75509 655 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 ZBTB11O95625 1053 aaPredicted RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 ITGAXP20702 1163 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 ITGADQ13349 1161 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 TDRD5Q8NAT2 981 aaKnown RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 GDPD5Q8WTR4 605 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 SEPT3Q9UH03 358 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 DMGDHQ9UI17 866 aaKnown RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 UBXN8O00124 270 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 ZNF37AP17032 561 aaPredicted RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 SP100P23497 879 aaPredicted RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 FOPNLQ96NB1 174 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 FOXN3O00409 490 aaPredicted RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 DARSP14868 501 aaKnown RBP12.78□□□□□ -0.36
ABCA3-201ENST00000301732 COMMD2Q86X83 199 aa12.78□□□□□ -0.36
ABCA3-201ENST00000301732 CELF6Q96J87 481 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms