RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 USP29Q9HBJ7 922 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 PTTG2Q9NZH5 202 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 PPME1Q9Y570 386 aa11.37□□□□□ -0.59
ZNF558-201ENST00000301475 C15orf38-AP3S2A0A0A6YYH1 394 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 ATP6V1G1O75348 118 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 RARRES1P49788 294 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 PSMC5P62195 406 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 CCNIQ14094 377 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 PDK3Q15120 406 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 KBTBD12Q3ZCT8 623 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 TEX44Q53QW1 395 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 EFHC1Q5JVL4 640 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 TRMT1LQ7Z2T5 733 aaKnown RBP11.36□□□□□ -0.59
ZNF558-201ENST00000301475 ARPINQ7Z6K5 226 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 PPIL6Q8IXY8 311 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 RCOR2Q8IZ40 523 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 SLC35B2Q8TB61 432 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 GDPD5Q8WTR4 605 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 PRICKLE1Q96MT3 831 aaPredicted RBP11.36□□□□□ -0.59
ZNF558-201ENST00000301475 WDR11Q9BZH6 1224 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 SMYD3Q9H7B4 428 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.36□□□□□ -0.59
ZNF558-201ENST00000301475 ZNRF3Q9ULT6 936 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 A0A0J9YVX5 310 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 TCRBV9S1A1TA0A576 114 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 F8VP50 259 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 CYB561D2O14569 222 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 FAM155BO75949 473 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 C6orf222P0C671 652 aaPredicted RBP11.36□□□□□ -0.59
ZNF558-201ENST00000301475 RGS2P41220 211 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 MAGEA8P43361 318 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 CACNB3P54284 484 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 RALGPS1Q5JS13 557 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 FAM182AQ5T1J6 154 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 LIN9Q5TKA1 542 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 LMBRD2Q68DH5 695 aaPredicted RBP11.36□□□□□ -0.59
ZNF558-201ENST00000301475 AAGABQ6PD74 315 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 PALM2Q8IXS6 379 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 SLC44A1Q8WWI5 657 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 C7orf26Q96N11 449 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 KLHL4Q9C0H6 718 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 WWP1Q9H0M0 922 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 GMEB1Q9Y692 573 aa11.36□□□□□ -0.59
ZNF558-201ENST00000301475 IQANK1A0A1B0GTG1 560 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 IPO5O00410 1097 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 TXNDC9O14530 226 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 PFDN1O60925 122 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 PDE5AO76074 875 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 GDF11O95390 407 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 TFAP2AP05549 437 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 CDKN2BP42772 138 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 CHN2P52757 468 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 NRLP54845 237 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 SH3BGRP55822 239 aaPredicted RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 DYNLT1P63172 113 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 TMPRSS15P98073 1019 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 TBL3Q12788 808 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 MMEL1Q495T6 779 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ANKRD20A4Q4UJ75 823 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 SLC27A3Q5K4L6 730 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ACBD5Q5T8D3 534 aaPredicted RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 SPOPLQ6IQ16 392 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 SLC39A4Q6P5W5 647 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 RBM44Q6ZP01 1051 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 METTL25Q8N6Q8 603 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 SLC26A7Q8TE54 656 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF526Q8TF50 670 aaPredicted RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 CCDC124Q96CT7 223 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 TEKT3Q9BXF9 490 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 C17orf75Q9HAS0 396 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 MRPL47Q9HD33 250 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 PCDHGB4Q9UN71 923 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 SOX13Q9UN79 622 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 PCDHGB5Q9Y5G0 923 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ZHX2Q9Y6X8 837 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ARHGAP42A6NI28 874 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 I3L4J1 428 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 MRPS5P82675 430 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 OGDHQ02218 1023 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 HIC1Q14526 733 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 POU5F2Q8N7G0 328 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 C1orf21Q9H246 121 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 DDX18Q9NVP1 670 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 HBS1LQ9Y450 684 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 COPEO14579 308 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 RPL22P35268 128 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 EPHB1P54762 984 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 CYP24A1Q07973 514 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 TRIP10Q15642 601 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 CHI3L2Q15782 390 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 ACTL9Q8TC94 416 aa11.35□□□□□ -0.59
ZNF558-201ENST00000301475 DGCR14Q96DF8 476 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 SENP7Q9BQF6 1050 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms