RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 UPF1Q92900 1129 aaKnown RBP eCLIP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 TMEM237Q96Q45 408 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 MAK16Q9BXY0 300 aaKnown RBP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 RRAGCQ9HB90 399 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SEPT10Q9P0V9 454 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 DCTN4Q9UJW0 460 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SUN1O94901 812 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 TGFB3P10600 412 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 FOXN2P32314 431 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SLC1A1P43005 524 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 RNASELQ05823 741 aaKnown RBP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 GOLGA7BQ2TAP0 167 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 TRNP1Q6NT89 227 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 FAM228AQ86W67 206 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 PYROXD2Q8N2H3 581 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SPATA18Q8TC71 538 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 KCNV2Q8TDN2 545 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 TMEM40Q8WWA1 233 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 CFAP36Q96G28 342 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 ATP8B3O60423 1300 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 ABLIM1O14639 778 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 RNF8O76064 485 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 RBP3P10745 1247 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 ELF3P78545 371 aaPredicted RBP14.18□□□□□ -0.14
TTC39B-201ENST00000297615 EML3Q32P44 896 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 TAPT1Q6NXT6 567 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 RHBDF2Q6PJF5 856 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 LPPQ93052 612 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 TRIM11Q96F44 468 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 SERPINB12Q96P63 405 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 PEBP4Q96S96 227 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 PTPN18Q99952 460 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 GJD2Q9UKL4 321 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 STYXL1Q9Y6J8 313 aa14.18□□□□□ -0.14
TTC39B-201ENST00000297615 A8MXQ7 604 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 TREHO43280 583 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 MAP2K2P36507 400 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 RTP1P59025 263 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 SNRPFP62306 86 aaKnown RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 PITX1P78337 314 aaPredicted RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 MCL1Q07820 350 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 OLIG2Q13516 323 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 HIC1Q14526 733 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 KRT81Q14533 505 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 CCNG2Q16589 344 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 ACCSLQ4AC99 568 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 FNBP1LQ5T0N5 605 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 ZPBP2Q6X784 338 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 PPP1R21Q6ZMI0 780 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 VSIG1Q86XK7 387 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 FITM2Q8N6M3 262 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 TTC16Q8NEE8 873 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 MAIP1Q8WWC4 291 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 TMEM176AQ96HP8 235 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 FAM81BQ96LP2 452 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 TRABDQ9H4I3 376 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 SCINQ9Y6U3 715 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 LIASO43766 372 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 CDH16O75309 829 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 TJP3O95049 919 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 RPA3P35244 121 aaPredicted RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 KLF1Q13351 362 aaPredicted RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 MOGSQ13724 837 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 NOL9Q5SY16 702 aaKnown RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 FAM183BPQ6ZVS7 135 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 PIGWQ7Z7B1 504 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 HACE1Q8IYU2 909 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 C12orf50Q8NA57 414 aaPredicted RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 GIMAP7Q8NHV1 300 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 TMEM134Q9H6X4 195 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 AVENQ9NQS1 362 aaPredicted RBP14.17□□□□□ -0.14
TTC39B-201ENST00000297615 TTLL3Q9Y4R7 772 aa14.17□□□□□ -0.14
TTC39B-201ENST00000297615 LOC102724159A0A0B4J2E5 919 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 CHUKO15111 745 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 MYBL1P10243 752 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 EIF3EP60228 445 aaKnown RBP14.16□□□□□ -0.14
TTC39B-201ENST00000297615 YWHAGP61981 247 aaKnown RBP eCLIP14.16□□□□□ -0.14
TTC39B-201ENST00000297615 MYO1EQ12965 1108 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 NME3Q13232 169 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 PWP2Q15269 919 aaKnown RBP14.16□□□□□ -0.14
TTC39B-201ENST00000297615 GPR142Q7Z601 462 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 FAM131BQ86XD5 332 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 SUGP1Q8IWZ8 645 aaKnown RBP14.16□□□□□ -0.14
TTC39B-201ENST00000297615 CCDC110Q8TBZ0 833 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 FAM167AQ96KS9 214 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 FZD8Q9H461 694 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 DHX35Q9H5Z1 703 aaKnown RBP14.16□□□□□ -0.14
TTC39B-201ENST00000297615 NOD2Q9HC29 1040 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 KLHL14Q9P2G3 628 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 MAD1L1Q9Y6D9 718 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 C5orf42Q9H799 3197 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 ASAP2O43150 1006 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 SLC25A27O95847 323 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 CYP2C9P11712 490 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 ATP5DP30049 168 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 MTHFD1LQ6UB35 978 aa14.16□□□□□ -0.14
TTC39B-201ENST00000297615 PHF13Q86YI8 300 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms